Paket: porechop (0.2.4+dfsg-1)

[ Quellcode: porechop  ]

adapter trimmer for Oxford Nanopore reads

Porechop is a tool for finding and removing adapters from Oxford Nanopore reads. Adapters on the ends of reads are trimmed off, and when a read has an adapter in its middle, it is treated as chimeric and chopped into separate reads. Porechop performs thorough alignments to effectively find adapters, even at low sequence identity. Porechop also supports demultiplexing of Nanopore reads that were barcoded with the Native Barcoding Kit, PCR Barcoding Kit or Rapid Barcoding Kit.

Andere Pakete mit Bezug zu porechop

• dep: libc6 (>= 2.14) [amd64]

  GNU-C-Bibliothek: Laufzeitbibliotheken
  auch ein virtuelles Paket, bereitgestellt durch libc6-udeb

  dep: libc6 (>= 2.17) [arm64]

  dep: libc6 (>= 2.4) [armhf, i386]

• dep: libgcc1 (>= 1:3.0) [nicht armhf]

  GCC Support-Bibliothek

  dep: libgcc1 (>= 1:3.5) [armhf]

• dep: libstdc++6 (>= 5.2)

  GNU-Implementierung der Standard-C++-Bibliothek (Version 3)

• dep: python3

  Interaktive objektorientierte Hochsprache (Python3-Standardversion)

  dep: python3 (>= 3~)

porechop herunterladen

Download für alle verfügbaren Architekturen

Architektur	Paketgröße	Größe (installiert)	Dateien
amd64	54,7 kB	237,0 kB	[Liste der Dateien]
arm64	52,1 kB	225,0 kB	[Liste der Dateien]
armhf	50,6 kB	208,0 kB	[Liste der Dateien]
i386	55,9 kB	236,0 kB	[Liste der Dateien]