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[ Source: python-pyvcf  ]

Package: python3-vcf (0.6.8+git20170215.476169c-10 and others)

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Variant Call Format-fortolker (VCF) for Python 3

Variant Call Format (VCF) specificerer formatet for en tekstfil brugt i bioinformatik for lagring af gensekvensvariationer. Formatet er blevet udviklet med fremkomsten af genotyping i stor skala og DNA-sekventeringsprojekter, såsom 1.000 genomer-projektet.

Formålet med denne pakke er at efterligne modulet »csv« i Pythons standardbibliotek, modsat de mere fleksible serialiseringsformater såsom JSON eller YAML. »Vcf« vil forsøge at fortolke indholdet af hver post baseret på datatyperne specificeret i metainformationslinjerne - specifikt linjerne ##INFO og ##FORMAT. Hvis disse linjer mangler eller er ufuldstændige, så vil der kontrolleres mod de reserverede typer nævnt i specifikationen. Hvis det fejler, så vil det bare returnere strenge.

Denne pakke indeholder Python 3-modulerne.

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Download python3-vcf

Download for all available architectures
Architecture Version Package Size Installed Size Files
alpha (unofficial port) 0.6.8+git20170215.476169c-10+b1 48.5 kB230.0 kB [list of files]
amd64 0.6.8+git20170215.476169c-10+b1 49.1 kB173.0 kB [list of files]
arm64 0.6.8+git20170215.476169c-10+b2 46.7 kB165.0 kB [list of files]
armel 0.6.8+git20170215.476169c-10+b1 46.0 kB160.0 kB [list of files]
armhf 0.6.8+git20170215.476169c-10+b1 45.5 kB144.0 kB [list of files]
hppa (unofficial port) 0.6.8+git20170215.476169c-3 56.8 kB229.0 kB [list of files]
i386 0.6.8+git20170215.476169c-10+b1 50.3 kB172.0 kB [list of files]
ia64 (unofficial port) 0.6.8+git20170215.476169c-10 59.6 kB274.0 kB [list of files]
m68k (unofficial port) 0.6.8+git20170215.476169c-10+b1 45.0 kB163.0 kB [list of files]
mips64el 0.6.8+git20170215.476169c-10+b1 46.3 kB232.0 kB [list of files]
ppc64 (unofficial port) 0.6.8+git20170215.476169c-3 57.4 kB361.0 kB [list of files]
ppc64el 0.6.8+git20170215.476169c-10+b1 50.9 kB229.0 kB [list of files]
riscv64 0.6.8+git20170215.476169c-10+b2 49.1 kB157.0 kB [list of files]
sh4 (unofficial port) 0.6.8+git20170215.476169c-10+b1 51.9 kB164.0 kB [list of files]
sparc64 (unofficial port) 0.6.8+git20170215.476169c-3 53.4 kB237.0 kB [list of files]
x32 (unofficial port) 0.6.8+git20170215.476169c-10+b1 49.7 kB168.0 kB [list of files]