Package: hmmer (3.3.2+dfsg-1)

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Profilskjulte Markov-modeller for proteinsekvensanalyse

HMMER er en implementering af profilskjulte Markov-modelmetoder for sensitive søgninger i biologiske sekvensdatabaser med brug af flersekvensjusteringer som forespørgsler.

Givet en flersekvensjustering som input, bygger HMMER en statistisk model kaldt »skjult Markovmodel«, som kan bruges som en forespørgsel ind i en sekvensdatabase for at finde (og/eller justere) yderligere homologier for sekvensfamilien.

Tags: Biology: Clustal/ALN, Proteins, Field: field::biology, field::biology:bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: Utility, Purpose: use::searching, works-with-format::plaintext, Works with: Databases

Other Packages Related to hmmer

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dep: libc6 (>= 2.29)

GNU C-bibliotek: Delte biblioteker
also a virtual package provided by libc6-udeb
dep: libdivsufsort3 (>= 2.0.1)

Hurtig suffiks-tabelkonstruktion

sug: hmmer-doc (>= 3.3.2+dfsg-1)

Profilskjulte Markov-modeller for proteinsekvensanalyse - dokumentation

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Architecture	Package Size	Installed Size	Files
amd64	1,126.1 kB	7,293.0 kB	[list of files]
i386	1,144.7 kB	7,031.0 kB	[list of files]