Пакет: libvcflib-tools (1.0.9+dfsg1-3 и други)
Връзки за libvcflib-tools
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Изтегляне на пакет-източник libvcflib.
- [libvcflib_1.0.9+dfsg1-3.dsc]
- [libvcflib_1.0.9+dfsg1.orig.tar.xz]
- [libvcflib_1.0.9+dfsg1-3.debian.tar.xz]
Отговорници:
Външни препратки:
- Начална страница [github.com]
Подобни пакети:
C++ library for parsing and manipulating VCF files (tools)
The Variant Call Format (VCF) is a flat-file, tab-delimited textual format intended to concisely describe reference-indexed variations between individuals. VCF provides a common interchange format for the description of variation in individuals and populations of samples, and has become the defacto standard reporting format for a wide array of genomic variant detectors.
vcflib provides methods to manipulate and interpret sequence variation as it can be described by VCF. It is both:
* an API for parsing and operating on records of genomic variation as it can be described by the VCF format, * and a collection of command-line utilities for executing complex manipulations on VCF files.
This package contains several tools using the library.
Други пакети, свързани с libvcflib-tools
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- dep: libbz2-1.0 [sparc64]
- high-quality block-sorting file compressor library - runtime
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- dep: libc6 (>= 2.34) [m68k, ppc64, sparc64, x32]
- GNU C Library: Shared libraries
също и виртуален пакет, предлаган от libc6-udeb
- dep: libc6 (>= 2.35) [sh4]
- dep: libc6 (>= 2.38) [amd64, arm64, mips64el, ppc64el, riscv64]
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- dep: libc6.1 (>= 2.34) [alpha]
- GNU C Library: Shared libraries
също и виртуален пакет, предлаган от libc6.1-udeb
- dep: libc6.1 (>= 2.35) [ia64]
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- dep: libdisorder0 (>= 0.0.2)
- library for entropy measurement of byte streams
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- dep: libfastahack0 (>= 0.0+git20160702.bbc645f) [amd64, arm64, ia64, mips64el, ppc64el, sparc64]
- library for indexing and sequence extraction from FASTA files (lib)
- dep: libfastahack0 (>= 1.0.0+dfsg) [alpha, m68k, ppc64, riscv64, sh4, x32]
-
- dep: libgcc-s1 (>= 3.0) [x32]
- GCC support library
- dep: libgcc-s1 (>= 3.3.1) [amd64, arm64, mips64el, ppc64el, riscv64]
- dep: libgcc-s1 (>= 3.4) [alpha, sh4, sparc64]
- dep: libgcc-s1 (>= 3.4.4) [ppc64]
- dep: libgcc-s1 (>= 4.2) [ia64]
-
- dep: libgcc-s2 (>= 4.2.1) [m68k]
- GCC support library
-
- dep: libgomp1 (>= 4.2.1) [не ia64, m68k, ppc64, sh4, x32]
- GCC OpenMP (GOMP) support library
-
- dep: libhts3 (>= 1.10) [sparc64]
- C library for high-throughput sequencing data formats
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- dep: liblzma5 (>= 5.1.1alpha+20110809) [sparc64]
- XZ-format compression library
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- dep: libsmithwaterman0 (>= 0.0+git20160702.2610e25)
- determine similar regions between two strings or genomic sequences (lib)
-
- dep: libssw0 (>= 1.1) [sparc64]
- fast SIMD parallelized implementation of the Smith-Waterman algorithm
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- dep: libstdc++6 (>= 11) [ia64, m68k, ppc64, sh4, sparc64, x32]
- GNU Standard C++ Library v3
- dep: libstdc++6 (>= 13.1) [amd64, arm64, mips64el, ppc64el, riscv64]
- dep: libstdc++6 (>= 13.2.0-7) [alpha]
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- dep: libtabixpp0 (>= 1.0.0) [не amd64, arm64, mips64el, ppc64el, riscv64]
- C++ wrapper to tabix indexer
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- dep: libtabixpp0t64 (>= 1.0.0) [amd64, arm64, mips64el, ppc64el, riscv64]
- C++ wrapper to tabix indexer
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- dep: libunwind8 [ia64]
- library to determine the call-chain of a program - runtime
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- dep: libvcflib1 (>= 1.0.3+dfsg) [ia64, m68k, ppc64, sh4, sparc64, x32]
- C++ library for parsing and manipulating VCF files
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- dep: libvcflib2 (>= 1.0.9+dfsg1) [alpha, amd64, arm64, mips64el, ppc64el, riscv64]
- C++ library for parsing and manipulating VCF files
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- dep: libwfa2-0 (>= 2.3.3) [alpha, amd64, arm64, mips64el, ppc64el, riscv64]
- exact gap-affine algorithm (shared library)
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: r-base-core
- GNU R core of statistical computation and graphics system
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- dep: r-cran-ggplot2
- implementation of the Grammar of Graphics
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- dep: r-cran-gridbase
- GNU R Integration of base and grid graphics
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- dep: r-cran-plyr
- tools for splitting, applying and combining data
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- dep: zlib1g (>= 1:1.1.4) [sparc64]
- compression library - runtime
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- sug: r-cran-pracma
- practical numerical math functions for GNU R
Изтегляне на libvcflib-tools
Архитектура | Версия | Големина на пакета | Големина след инсталиране | Файлове |
---|---|---|---|---|
alpha (неофициална архитектура) | 1.0.9+dfsg1-3 | 613,1 кБ | 6 870,0 кБ | [списък на файловете] |
amd64 | 1.0.9+dfsg1-3+b2 | 645,0 кБ | 3 846,0 кБ | [списък на файловете] |
arm64 | 1.0.9+dfsg1-3+b2 | 576,5 кБ | 6 594,0 кБ | [списък на файловете] |
ia64 (неофициална архитектура) | 1.0.3+dfsg-2 | 853,2 кБ | 8 189,0 кБ | [списък на файловете] |
m68k (неофициална архитектура) | 1.0.3+dfsg-2 | 711,2 кБ | 4 531,0 кБ | [списък на файловете] |
mips64el | 1.0.9+dfsg1-3+b2 | 605,3 кБ | 6 919,0 кБ | [списък на файловете] |
ppc64 (неофициална архитектура) | 1.0.3+dfsg-2 | 707,1 кБ | 8 228,0 кБ | [списък на файловете] |
ppc64el | 1.0.9+dfsg1-3+b2 | 630,3 кБ | 6 850,0 кБ | [списък на файловете] |
riscv64 | 1.0.9+dfsg1-3+b2 | 612,6 кБ | 2 874,0 кБ | [списък на файловете] |
sh4 (неофициална архитектура) | 1.0.3+dfsg-2 | 808,7 кБ | 6 691,0 кБ | [списък на файловете] |
sparc64 (неофициална архитектура) | 1.0.3+dfsg-2 | 816,8 кБ | 91 827,0 кБ | [списък на файловете] |
x32 (неофициална архитектура) | 1.0.3+dfsg-2 | 729,6 кБ | 4 483,0 кБ | [списък на файловете] |