Пакет: bitseq (0.7.5+dfsg-5)

[ Източник: bitseq  ]

Bayesian Inference of Transcripts from Sequencing Data

BitSeq is an application for inferring expression levels of individual transcripts from sequencing (RNA-Seq) data and estimating differential expression (DE) between conditions. An advantage of this approach is the ability to account for both technical uncertainty and intrinsic biological variance in order to avoid false DE calls. The technical contribution to the uncertainty comes both from finite read-depth and the possibly ambiguous mapping of reads to multiple transcripts.

Други пакети, свързани с bitseq

• dep: libc6 (>= 2.23)

  GNU C Library: Shared libraries
  също и виртуален пакет, предлаган от libc6-udeb

• dep: libgcc1 (>= 1:3.0)

  Пакетът не е наличен

• dep: libgomp1 (>= 6)

  GCC OpenMP (GOMP) support library

• dep: libstdc++6 (>= 5.2)

  GNU Standard C++ Library v3

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: python3-numpy

  Fast array facility to the Python 3 language

• dep: zlib1g (>= 1:1.2.3.3)

  compression library - runtime

• sug: samtools

  processing sequence alignments in SAM, BAM and CRAM formats

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Архитектура	Големина на пакета	Големина след инсталиране	Файлове
i386	358,3 кБ	1 906,0 кБ	[списък на файловете]