套件：fasttree（2.1.11-2 以及其他的）

fasttree 的相關連結

Debian 的資源：

下載原始碼套件 fasttree：

維護小組：

外部的資源：

主頁 [www.microbesonline.org]

相似套件：

phylogenetic trees from alignments of nucleotide or protein sequences

FastTree infers approximately-maximum-likelihood phylogenetic trees from alignments of nucleotide or protein sequences. It handles alignments with up to a million of sequences in a reasonable amount of time and memory. For large alignments, FastTree is 100-1,000 times faster than PhyML 3.0 or RAxML 7.

FastTree is more accurate than PhyML 3 with default settings, and much more accurate than the distance-matrix methods that are traditionally used for large alignments. FastTree uses the Jukes-Cantor or generalized time-reversible (GTR) models of nucleotide evolution and the JTT (Jones-Taylor-Thornton 1992) model of amino acid evolution. To account for the varying rates of evolution across sites, FastTree uses a single rate for each site (the "CAT" approximation). To quickly estimate the reliability of each split in the tree, FastTree computes local support values with the Shimodaira-Hasegawa test (these are the same as PhyML 3's "SH-like local supports").

This package contains a single threaded version (fasttree) and a parallel version which uses OpenMP (fasttreMP).

其他與 fasttree 有關的套件

依賴

推薦

建議

增強

dep: libc6 (>= 2.29) [除 arm64, riscv64]

GNU C 函式庫：共用函式庫
同時作為一個虛擬套件由這些套件填實： libc6-udeb

dep: libc6 (>= 2.34) [arm64, riscv64]
dep: libgomp1 (>= 6)

GCC OpenMP (GOMP) support library

下載 fasttree

下載可用於所有硬體架構的
硬體架構	版本	套件大小	安裝後大小	檔案
amd64	2.1.11-2	176。6 kB	483。0 kB	[檔案列表]
arm64	2.1.11-2+b1	171。2 kB	507。0 kB	[檔案列表]
armel	2.1.11-2	172。2 kB	509。0 kB	[檔案列表]
armhf	2.1.11-2	164。9 kB	385。0 kB	[檔案列表]
i386	2.1.11-2	178。9 kB	517。0 kB	[檔案列表]
mips64el	2.1.11-2	171。5 kB	527。0 kB	[檔案列表]
ppc64el	2.1.11-2	181。9 kB	635。0 kB	[檔案列表]
riscv64	2.1.11-2+b1	178。3 kB	423。0 kB	[檔案列表]
s390x	2.1.11-2	166。4 kB	493。0 kB	[檔案列表]