套件：proteinortho（6.0.31+dfsg-2） [debports]
Detection of (Co-)orthologs in large-scale protein analysis
Proteinortho is a stand-alone tool that is geared towards large datasets and makes use of distributed computing techniques when run on multi-core hardware. It implements an extended version of the reciprocal best alignment heuristic. Proteinortho was applied to compute orthologous proteins in the complete set of all 717 eubacterial genomes available at NCBI at the beginning of 2009. Authors succeeded identifying thirty proteins present in 99% of all bacterial proteomes.
其他與 proteinortho 有關的套件
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- dep: diamond-aligner
- accelerated BLAST compatible local sequence aligner
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- dep: libc6 (>= 2.32)
- GNU C 函式庫：共用函式庫
同時作為一個虛擬套件由這些套件填實： libc6-udeb
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- dep: libgcc-s1 (>= 3.4)
- GCC 支援函式庫
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- dep: libgomp1 (>= 6)
- GCC OpenMP (GOMP) support library
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- dep: liblapack3
- Library of linear algebra routines 3 - shared version
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- dep: libstdc++6 (>= 11)
- GNU Standard C++ Library v3
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- dep: ncbi-blast+
- next generation suite of BLAST sequence search tools
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- dep: perl
- Larry Wall's Practical Extraction and Report Language
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- dep: procps
- /proc file system utilities
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- dep: python3
- interactive high-level object-oriented language (default python3 version)