套件：r-cran-dharma（0.4.7-2）
Residual Diagnostics for Hierarchical (Multi-Level / Mixed) Regression Models
The 'DHARMa' package uses a simulation-based approach to create readily interpretable scaled (quantile) residuals for fitted (generalized) linear mixed models. Currently supported are linear and generalized linear (mixed) models from 'lme4' (classes 'lmerMod', 'glmerMod'), 'glmmTMB', 'GLMMadaptive', and 'spaMM'; phylogenetic linear models from 'phylolm' (classes 'phylolm' and 'phyloglm'); generalized additive models ('gam' from 'mgcv'); 'glm' (including 'negbin' from 'MASS', but excluding quasi- distributions) and 'lm' model classes. Moreover, externally created simulations, e.g. posterior predictive simulations from Bayesian software such as 'JAGS', 'STAN', or 'BUGS' can be processed as well. The resulting residuals are standardized to values between 0 and 1 and can be interpreted as intuitively as residuals from a linear regression. The package also provides a number of plot and test functions for typical model misspecification problems, such as over/underdispersion, zero- inflation, and residual spatial, phylogenetic and temporal autocorrelation.
其他與 r-cran-dharma 有關的套件
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- dep: r-api-4.0
- 本虛擬套件由這些套件填實： r-base-core
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- dep: r-cran-ape
- GNU R package for Analyses of Phylogenetics and Evolution
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- dep: r-cran-gap
- Genetic Analysis Package
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- dep: r-cran-lme4
- GNU R package for linear mixed effects model fitting
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- dep: r-cran-lmtest
- GNU R package for diagnostic checking in linear models
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- dep: r-cran-matrix
- GNU R package of classes for dense and sparse matrices
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- dep: r-cran-qgam (>= 1.3.2)
- Smooth Additive Quantile Regression Models
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- rec: r-cran-kernsmooth
- GNU R package for kernel smoothing and density estimation
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- rec: r-cran-knitr
- GNU R package for dynamic report generation using Literate Programming
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- rec: r-cran-mass
- GNU R package of Venables and Ripley's MASS
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- rec: r-cran-mgcv
- GNU R package for multiple parameter smoothing estimation
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- rec: r-cran-rmarkdown
- convert R markdown documents into a variety of formats
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- rec: r-cran-sfsmisc
- GNU R utilities from 'Seminar fuer Statistik' ETH Zurich
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- rec: r-cran-testthat (>= 3.0.0)
- GNU R testsuite
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- sug: r-cran-glmmtmb (>= 1.1.2.3)
- Generalized Linear Mixed Models using Template Model Builder