Paket: r-cran-dharma (0.4.7-2)

[ Källkod: r-cran-dharma  ]

Residual Diagnostics for Hierarchical (Multi-Level / Mixed) Regression Models

The 'DHARMa' package uses a simulation-based approach to create readily interpretable scaled (quantile) residuals for fitted (generalized) linear mixed models. Currently supported are linear and generalized linear (mixed) models from 'lme4' (classes 'lmerMod', 'glmerMod'), 'glmmTMB', 'GLMMadaptive', and 'spaMM'; phylogenetic linear models from 'phylolm' (classes 'phylolm' and 'phyloglm'); generalized additive models ('gam' from 'mgcv'); 'glm' (including 'negbin' from 'MASS', but excluding quasi- distributions) and 'lm' model classes. Moreover, externally created simulations, e.g. posterior predictive simulations from Bayesian software such as 'JAGS', 'STAN', or 'BUGS' can be processed as well. The resulting residuals are standardized to values between 0 and 1 and can be interpreted as intuitively as residuals from a linear regression. The package also provides a number of plot and test functions for typical model misspecification problems, such as over/underdispersion, zero- inflation, and residual spatial, phylogenetic and temporal autocorrelation.

Andra paket besläktade med r-cran-dharma

• dep: r-api-4.0

  virtuellt paket som tillhandahålls av r-base-core

• dep: r-cran-ape

  GNU R package for Analyses of Phylogenetics and Evolution

• dep: r-cran-gap

  Genetic Analysis Package

• dep: r-cran-lme4

  GNU R package for linear mixed effects model fitting

• dep: r-cran-lmtest

  GNU R package for diagnostic checking in linear models

• dep: r-cran-matrix

  GNU R package of classes for dense and sparse matrices

• dep: r-cran-qgam (>= 1.3.2)

  Smooth Additive Quantile Regression Models

• rec: r-cran-kernsmooth

  GNU R package for kernel smoothing and density estimation

• rec: r-cran-knitr

  GNU R package for dynamic report generation using Literate Programming

• rec: r-cran-mass

  GNU R package of Venables and Ripley's MASS

• rec: r-cran-mgcv

  GNU R package for multiple parameter smoothing estimation

• rec: r-cran-rmarkdown

  convert R markdown documents into a variety of formats

• rec: r-cran-sfsmisc

  GNU R utilities from 'Seminar fuer Statistik' ETH Zurich

• rec: r-cran-testthat (>= 3.0.0)

  GNU R testsuite

• sug: r-cran-glmmtmb (>= 1.1.2.3)

  Generalized Linear Mixed Models using Template Model Builder

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