套件：r-bioc-rtracklayer（1.64.0-1） [debports]
GNU R interface to genome browsers and their annotation tracks
Extensible framework for interacting with multiple genome browsers (currently UCSC built-in) and manipulating annotation tracks in various formats (currently GFF, BED, bedGraph, BED15, WIG, BigWig and 2bit built-in). The user may export/import tracks to/from the supported browsers, as well as query and modify the browser state, such as the current viewport.
其他與 r-bioc-rtracklayer 有關的套件
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- dep: libc6.1 (>= 2.38)
- GNU C 函式庫：共用函式庫
同時作為一個虛擬套件由這些套件填實： libc6.1-udeb
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- dep: libcurl4t64 (>= 7.16.2)
- easy-to-use client-side URL transfer library (OpenSSL flavour)
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- dep: libssl3t64 (>= 3.0.0)
- Secure Sockets Layer toolkit - shared libraries
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- dep: r-api-4.0
- 本虛擬套件由這些套件填實： r-base-core
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- dep: r-api-bioc-3.19
- 本虛擬套件由這些套件填實： r-bioc-biocgenerics
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- dep: r-bioc-biocgenerics (>= 0.50.0)
- generic functions for Bioconductor
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- dep: r-bioc-biocio (>= 1.14.0)
- standard input and output for Bioconductor packages
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- dep: r-bioc-biostrings (>= 2.72.1)
- GNU R string objects representing biological sequences
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- dep: r-bioc-genomeinfodb (>= 1.40.1)
- BioConductor utilities for manipulating chromosome identifiers
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- dep: r-bioc-genomicalignments (>= 1.40.0)
- BioConductor representation and manipulation of short genomic alignments
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- dep: r-bioc-genomicranges (>= 1.56.1)
- BioConductor representation and manipulation of genomic intervals
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- dep: r-bioc-iranges (>= 2.38.1)
- GNU R low-level containers for storing sets of integer ranges
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- dep: r-bioc-rsamtools (>= 2.20.0)
- GNU R binary alignment (BAM), variant call (BCF), or tabix file import
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- dep: r-bioc-s4vectors (>= 0.42.1)
- BioConductor S4 implementation of vectors and lists
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- dep: r-bioc-xvector (>= 0.44.0)
- BioConductor representation and manpulation of external sequences
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- dep: r-bioc-zlibbioc (>= 1.50.0)
- (Virtual) zlibbioc Bioconductor package
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- dep: r-cran-curl
- GNU R modern and flexible web client for R
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- dep: r-cran-httr
- GNU R tools for working with URLs and HTTP
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- dep: r-cran-restfulr (>= 0.0.13)
- GNU R interface to RESTful web wervices
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- dep: r-cran-xml (>= 1.98-0)
- GNU R package for XML parsing and generation
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- dep: zlib1g (>= 1:1.1.4)
- 壓縮函式庫 - 跑程式時用(runtime)
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- sug: r-bioc-bsgenome (>= 1.72.0)
- BioConductor infrastructure for Biostrings-based genome data packages
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- sug: r-bioc-genefilter (>= 1.86.0)
- methods for filtering genes from microarray experiments
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- sug: r-bioc-genomicfeatures (>= 1.56.0)
- GNU R tools for making and manipulating transcript centric annotations
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- sug: r-bioc-limma (>= 3.60.3)
- linear models for microarray data
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- sug: r-bioc-org.hs.eg.db (>= 3.19.1)
- genome-wide annotation for Human
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- sug: r-cran-runit
- GNU R package providing unit testing framework