[ 原始碼： gbrowse ]
套件：gbrowse（2.56+dfsg-4）
gbrowse 的相關連結
Debian 的資源：
下載原始碼套件 gbrowse：
維護小組：
- Debian Med Packaging Team (QA 頁面, 郵件存檔)
- Olivier Sallou (QA 頁面)
- Charles Plessy (QA 頁面)
- Aaron M. Ucko (QA 頁面)
- Andreas Tille (QA 頁面)
外部的資源：
- 主頁 [www.gbrowse.org]
相似套件：
GMOD Generic Genome Browser
Generic Genome Browser is a simple but highly configurable web-based genome browser. It is a component of the Generic Model Organism Systems Database project (GMOD). Some of its features:
* Simultaneous bird's eye and detailed views of the genome; * Scroll, zoom, center; * Attach arbitrary URLs to any annotation; * Order and appearance of tracks are customizable by administrator and end-user; * Search by annotation ID, name, or comment; * Supports third party annotation using GFF formats; * Settings persist across sessions; * DNA and GFF dumps; * Connectivity to different databases, including BioSQL and Chado; * Multi-language support; * Third-party feature loading; * Customizable plug-in architecture (e.g. run BLAST, dump & import many formats, find oligonucleotides, design primers, create restriction maps, edit features).
其他與 gbrowse 有關的套件
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- dep: apache2 (>= 2.4)
- Apache HTTP Server
- 或者 httpd-cgi
- 本虛擬套件由這些套件填實： apache2, lighttpd, mini-httpd, nginx-extras, nginx-full, nginx-light, tntnet, yaws
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- dep: bioperl
- Perl tools for computational molecular biology
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- dep: libbio-coordinate-perl
- BioPerl modules for working with biological coordinates
-
- dep: libbio-graphics-perl (>= 2.31)
- Generate GD images of Bio::Seq objects
-
- dep: libcgi-session-perl
- persistent session data in CGI applications
-
- dep: libdbd-sqlite3-perl
- Perl DBI driver with a self-contained RDBMS
-
- dep: libgd-gd2-noxpm-perl
- 本虛擬套件由這些套件填實： libgd-perl
- 或者 libgd-gd2-perl
- 本虛擬套件由這些套件填實： libgd-perl
-
- dep: libhttp-daemon-perl
- simple http server class
-
- dep: libio-string-perl
- Emulate IO::File interface for in-core strings
-
- dep: libjs-prototype
- JavaScript Framework for dynamic web applications
-
- dep: libjs-scriptaculous
- JavaScript library for dynamic web applications
-
- dep: libjson-perl
- module for manipulating JSON-formatted data
-
- dep: libstatistics-descriptive-perl
- Perl module for basic descriptive statistical functions
-
- dep: libterm-readkey-perl
- perl module for simple terminal control
-
- dep: libvm-ec2-perl
- module providing controls on Amazon EC2 and Eucalyptus
-
- dep: libwww-perl
- simple and consistent interface to the world-wide web
-
- dep: lsb-base
- Linux Standard Base init script functionality
-
- dep: perl
- Larry Wall's Practical Extraction and Report Language
-
- dep: sqlite3
- Command line interface for SQLite 3
-
- rec: apache2 (>= 2.4.6-4~)
- Apache HTTP Server
- 或者 httpd
- 本虛擬套件由這些套件填實： apache2, ebhttpd, lighttpd, micro-httpd, mini-httpd, nginx-extras, nginx-full, nginx-light, tntnet, webfs, yaws
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- sug: gbrowse-calign
- CAlign helper
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- sug: gbrowse-data
- Sample data to use GBrowse
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- sug: libfile-nfslock-perl
- perl module to do NFS (or not) locking