套件:python3-dna-jellyfish(2.3.0-10)
python3-dna-jellyfish 的相關連結
Debian 的資源:
下載原始碼套件 jellyfish:
維護小組:
- Debian Med Packaging Team (QA 頁面, 郵件存檔)
- Shaun Jackman (QA 頁面)
- Andreas Tille (QA 頁面)
- Michael R. Crusoe (QA 頁面)
外部的資源:
- 主頁 [www.cbcb.umd.edu]
相似套件:
count k-mers in DNA sequences (Python bindings of jellyfish)
JELLYFISH is a tool for fast, memory-efficient counting of k-mers in DNA. A k-mer is a substring of length k, and counting the occurrences of all such substrings is a central step in many analyses of DNA sequence. JELLYFISH can count k-mers using an order of magnitude less memory and an order of magnitude faster than other k-mer counting packages by using an efficient encoding of a hash table and by exploiting the "compare-and-swap" CPU instruction to increase parallelism.
JELLYFISH is a command-line program that reads FASTA and multi-FASTA files containing DNA sequences. It outputs its k-mer counts in an binary format, which can be translated into a human-readable text format using the "jellyfish dump" command.
This package contains the Python bindings of jellyfish.
其他與 python3-dna-jellyfish 有關的套件
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- dep: libc6 (>= 2.17)
- GNU C 函式庫:共用函式庫
同時作為一個虛擬套件由這些套件填實: libc6-udeb
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- dep: libgcc-s1 (>= 3.0)
- GCC 支援函式庫
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- dep: libjellyfish-2.0-2 (>= 2.3.0)
- count k-mers in DNA sequences (dynamic library of jellyfish)
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- dep: libstdc++6 (>= 9)
- GNU Standard C++ Library v3
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
- dep: python3 (<< 3.10)
- dep: python3 (>= 3.9~)