[ 原始碼： mmseqs2 ]
套件：mmseqs2（14-7e284+ds-1 以及其他的）
ultra fast and sensitive protein search and clustering
MMseqs2 (Many-against-Many sequence searching) is a software suite to search and cluster huge proteins/nucleotide sequence sets. MMseqs2 is open source GPL-licensed software implemented in C++ for Linux, MacOS, and (as beta version, via cygwin) Windows. The software is designed to run on multiple cores and servers and exhibits very good scalability. MMseqs2 can run 10000 times faster than BLAST. At 100 times its speed it achieves almost the same sensitivity. It can perform profile searches with the same sensitivity as PSI-BLAST at over 400 times its speed.
其他與 mmseqs2 有關的套件
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- dep: libatomic1 (>= 4.8)
- support library providing __atomic built-in functions
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- dep: libbz2-1.0
- high-quality block-sorting file compressor library - runtime
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- dep: libc6 (>= 2.34)
- GNU C 函式庫：共用函式庫
同時作為一個虛擬套件由這些套件填實： libc6-udeb
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- dep: libgcc-s1 (>= 3.4)
- GCC 支援函式庫
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- dep: libgomp1 (>= 6)
- GCC OpenMP (GOMP) support library
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- dep: libgzstream0 (>= 1.5+dfsg)
- provide functionality of zlib C-library in a C++ iostream
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- dep: libstdc++6 (>= 11)
- GNU Standard C++ Library v3
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- dep: zlib1g (>= 1:1.2.6)
- 壓縮函式庫 - 跑程式時用(runtime)