套件：indelible（1.03-5）

[ 原始碼： indelible  ]

powerful and flexible simulator of biological evolution

INDELible is a new, portable, and flexible application for biological sequence simulation that combines many features in the same place for the first time. Using a length-dependent model of indel formation it can simulate evolution of multi-partitioned nucleotide, amino-acid, or codon data sets through the processes of insertion, deletion, and substitution in continuous time.

Nucleotide simulations may use the general unrestricted model or the general time reversible model and its derivatives, and amino-acid simulations can be conducted using fifteen different empirical rate matrices. Substitution rate heterogeneity can be modeled via the continuous and discrete gamma distributions, with or without a proportion of invariant sites. INDELible can also simulate under non-homogeneous and non-stationary conditions where evolutionary models are permitted to change across a phylogeny.

Unique among indel simulation programs, INDELible offers the ability to simulate using codon models that exhibit nonsynonymous/synonymous rate ratio heterogeneity among sites and/or lineages.

其他與 indelible 有關的套件

• dep: libc6 (>= 2.29)

  GNU C 函式庫：共用函式庫
  同時作為一個虛擬套件由這些套件填實： libc6-udeb

• dep: libgcc-s1 (>= 3.0) [除 armel, armhf]

  GCC 支援函式庫

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libstdc++6 (>= 9)

  GNU Standard C++ Library v3

下載 indelible

下載可用於所有硬體架構的

硬體架構	套件大小	安裝後大小	檔案
amd64	409。5 kB	1，463。0 kB	[檔案列表]
arm64	371。6 kB	1，291。0 kB	[檔案列表]
armel	395。9 kB	1，398。0 kB	[檔案列表]
armhf	402。3 kB	1，194。0 kB	[檔案列表]
i386	411。5 kB	1，514。0 kB	[檔案列表]
mips64el	375。9 kB	1，444。0 kB	[檔案列表]
mipsel	390。3 kB	1，497。0 kB	[檔案列表]
ppc64el	398。7 kB	1，439。0 kB	[檔案列表]
s390x	363。4 kB	1，387。0 kB	[檔案列表]