[ 源代码： stacks ]
软件包：stacks（2.68+dfsg-1）
pipeline for building loci from short-read DNA sequences
Stacks is a software pipeline for building loci from short-read sequences, such as those generated on the Illumina platform. Stacks was developed to work with restriction enzyme-based data, such as RAD-seq, for the purpose of building genetic maps and conducting population genomics and phylogeography.
Note that this package installs Stacks such that all commands must be run as: $ stacks <cmdname> <args>
其他与 stacks 有关的软件包
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- dep: bsdextrautils
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- dep: libhts3t64 (>= 1.17)
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- dep: libstdc++6 (>= 14)
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- dep: samtools
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- rec: libspreadsheet-writeexcel-perl
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- sug: gdb
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