软件包：quicktree（2.5-6 以及其他的）

[ 源代码： quicktree  ]

Neighbor-Joining algorithm for phylogenies

QuickTree is an efficient implementation of the Neighbor-Joining algorithm (PMID: 3447015), capable of reconstructing phylogenies from huge alignments in time less than the age of the universe.

QuickTree accepts both distance matrix and multiple-sequence-aligment inputs. The former should be in PHYLIP format. The latter should be in Stockholm format, which is the native alignment format for the Pfam database. Alignments in various formats can be converted to Stockholm format with the sreformat program, which is part of the HMMer package (hmmer.org).

The tress are written to stdout, in the Newick/New-Hampshire format use by PHYLIP and many other programs

其他与 quicktree 有关的软件包

• dep: libc6 (>= 2.34)

  GNU C 语言运行库：共享库
  同时作为一个虚包由这些包填实： libc6-udeb

• sug: hmmer

  profile hidden Markov models for protein sequence analysis

  或者 hmmer2

  profile hidden Markov models for protein sequence analysis

下载 quicktree

下载可用于所有硬件架构的

硬件架构	版本	软件包大小	安装后大小	文件
amd64	2.5-6	21.1 kB	57.0 kB	[文件列表]
arm64	2.5-6+b1	20.2 kB	85.0 kB	[文件列表]
armel	2.5-6	20.1 kB	56.0 kB	[文件列表]
armhf	2.5-6	17.8 kB	44.0 kB	[文件列表]
i386	2.5-6	21.8 kB	60.0 kB	[文件列表]
mips64el	2.5-6	21.5 kB	87.0 kB	[文件列表]
ppc64el	2.5-6	23.8 kB	85.0 kB	[文件列表]
riscv64	2.5-6+b1	21.6 kB	53.0 kB	[文件列表]
s390x	2.5-6	21.2 kB	60.0 kB	[文件列表]