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[ 源代码: tiddit  ]

软件包:tiddit(3.6.1+dfsg-1 以及其他的)

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structural variant calling

TIDDIT is a tool to used to identify chromosomal rearrangements using Mate Pair or Paired End sequencing data. TIDDIT identifies intra and inter- chromosomal translocations, deletions, tandem-duplications and inversions, using supplementary alignments as well as discordant pairs.

TIDDIT has two analysis modules. The sv mode, which is used to search for structural variants. And the cov mode that analyse the read depth of a bam file and generates a coverage report.

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下载可用于所有硬件架构的
硬件架构 版本 软件包大小 安装后大小 文件
i386 3.6.1+dfsg-1+b2 280.2 kB1,284.0 kB [文件列表]