软件包：bedtools（2.31.1+dfsg-2）

[ 源代码： bedtools  ]

suite of utilities for comparing genomic features

The BEDTools utilities allow one to address common genomics tasks such as finding feature overlaps and computing coverage. The utilities are largely based on four widely-used file formats: BED, GFF/GTF, VCF, and SAM/BAM. Using BEDTools, one can develop sophisticated pipelines that answer complicated research questions by streaming several BEDTools together.

The groupBy utility is distributed in the filo package.

标签: 领域: 生物学, 生物信息学, 实做语言: implemented-in::c++, interface::commandline, 角色: 程序, 范围: 套装软件, Purpose: use::analysing, use::comparing, 数据转换, use::filtering, works-with::biological-sequence

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