软件包：gbrowse（2.56+dfsg-12）

[ 源代码： gbrowse  ]

GMOD Generic Genome Browser

Generic Genome Browser is a simple but highly configurable web-based genome browser. It is a component of the Generic Model Organism Systems Database project (GMOD). Some of its features:

 * Simultaneous bird's eye and detailed views of the genome;
 * Scroll, zoom, center;
 * Attach arbitrary URLs to any annotation;
 * Order and appearance of tracks are customizable by administrator and
   end-user;
 * Search by annotation ID, name, or comment;
 * Supports third party annotation using GFF formats;
 * Settings persist across sessions;
 * DNA and GFF dumps;
 * Connectivity to different databases, including BioSQL and Chado;
 * Multi-language support;
 * Third-party feature loading;
 * Customizable plug-in architecture (e.g. run BLAST, dump & import many
   formats, find oligonucleotides, design primers, create restriction maps,
   edit features).

标签: 领域: 生物学, 生物信息学, 实做语言: implemented-in::perl, interface::web, 角色: 程序, Purpose: Analysing, use::viewing, web::application, 万维网: CGI

其他与 gbrowse 有关的软件包

• dep: apache2

  Apache HTTP Server

  或者 httpd-cgi

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• dep: bioperl

  用于处理计算分子生物学的 Perl 工具

• dep: libbio-coordinate-perl

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• dep: libbio-db-seqfeature-perl

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• dep: libcgi-session-perl

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• dep: libdbd-sqlite3-perl

  Perl DBI driver with a self-contained RDBMS

• dep: libgd-gd2-noxpm-perl

  本虚包由这些包填实： libgd-perl

  或者 libgd-gd2-perl

  本虚包由这些包填实： libgd-perl

• dep: libhttp-daemon-perl

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• dep: libio-string-perl

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• dep: libjs-prototype

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• dep: libjs-scriptaculous

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• dep: libjson-perl

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• dep: libterm-readkey-perl

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• dep: libvm-ec2-perl

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• dep: libwww-perl

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• dep: perl

  拉里 沃尔的实用报表提取语言(Perl)

• dep: sqlite3

  SQLite 3 命令行界面

• rec: apache2 (>= 2.4.6-4~)

  Apache HTTP Server

  或者 httpd

  本虚包由这些包填实： apache2, lighttpd, merecat, micro-httpd, mini-httpd, nginx, tntnet, webfs, yaws

• sug: gbrowse-calign

  CAlign helper

• sug: gbrowse-data

  Sample data to use GBrowse

• sug: libfile-nfslock-perl

  perl module to do NFS (or not) locking

下载 gbrowse

下载可用于所有硬件架构的

硬件架构	软件包大小	安装后大小	文件
all	2,317.7 kB	7,017.0 kB	[文件列表]