源码包：snpeff（5.2.e+dfsg-1）
本源码包构建了以下这些二进制包：
- libsnpeff-java
- genetic variant annotation and effect prediction toolbox - lib
- libsnpeff-java-doc
- Documentation for Snp Effect
- snpeff
- genetic variant annotation and effect prediction toolbox - tool
其他与 snpeff 有关的软件包
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- adep: debhelper-compat (= 13)
- 软件包暂时不可用
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- adep: javahelper
- Helper scripts for packaging Java programs
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- adep: default-jdk
- Standard Java or Java compatible Development Kit
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- adep: default-jdk-doc
- Standard Java or Java compatible Development Kit (documentation)
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- adep: maven-debian-helper
- Helper tools for building Debian packages with Maven
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- adep: libmaven-assembly-plugin-java
- Maven Assembly Plugin
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- adep: libtrove3-java
- high performance collections for java
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- adep: libhtsjdk-java
- Java API for high-throughput sequencing data (HTS) formats
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- adep: libbiojava6-java
- Java API to biological data and applications (version 6)
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- adep: junit5
- JUnit regression test framework for Java
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- adep: libcommons-codec-java
- encoder and decoders such as Base64 and hexadecimal codec
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- adep: libcommons-io-java
- Common useful IO related classes
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- adep: libcommons-cli-java
- Command line arguments and options parsing library
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- adep: libcommons-math3-java
- Java lightweight mathematics and statistics components
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- adep: libfreemarker-java
- template engine written in Java
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- adep: libjaxb-api-java
- Java Architecture for XML Binding API
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- adep: libmaven-javadoc-plugin-java
- Maven Javadoc Plugin
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- adep: libbiojava6-java-doc
- [Biology] Documentation for BioJava 6
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- adep: libtrove3-java-doc
- high performance collections for java
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- adep: libcharts4j-java
- free, lightweight charts and graphs Java API
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- adep: libapfloat-java
- high performance arbitrary precision arithmetic library for Java
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- adep: libdistlib-java
- Java library of statistical distribution functions
Download snpeff
| 文件 | 大小（单位：kB） | MD5 校验码 |
|---|---|---|
| snpeff_5.2.e+dfsg-1.dsc | 2.5 kB | 718f10a8ff149f7b5e003416c53429b5 |
| snpeff_5.2.e+dfsg.orig.tar.xz | 151,278.1 kB | 5881f26c0692e8fd2b4acdc716f42355 |
| snpeff_5.2.e+dfsg-1.debian.tar.xz | 13.9 kB | e4d6f7abf6f67562cc810f03a4ffce2d |
- Debian 软件包源码仓库（VCS：Git）
- https://salsa.debian.org/med-team/snpeff.git
- Debian 软件包源码仓库（可在线浏览）
- https://salsa.debian.org/med-team/snpeff