[ trixie ]
[ sid ]
[ experimental ]
软件包：libhts3t64（1.19+ds-1.1 以及其他的） [debports]
C library for high-throughput sequencing data formats
HTSlib is an implementation of a unified C library for accessing common file formats, such as SAM (Sequence Alignment/Map), CRAM and VCF (Variant Call Format), used for high-throughput sequencing data, and is the core library used by samtools and bcftools. HTSlib only depends on zlib. It is known to be compatible with gcc, g++ and clang.
HTSlib implements a generalized BAM (binary SAM) index, with file extension ‘csi’ (coordinate-sorted index). The HTSlib file reader first looks for the new index and then for the old if the new index is absent.
其他与 libhts3t64 有关的软件包
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- dep: libbz2-1.0
- 高品质块排序文件压缩程序库 - 运行时库
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- dep: libc6.1 (>= 2.37)
- GNU C 语言运行库：共享库
同时作为一个虚包由这些包填实： libc6.1-udeb
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- dep: libcurl3-gnutls (>= 7.18.0)
- easy-to-use client-side URL transfer library (GnuTLS flavour)
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- dep: libdeflate0 (>= 1.0)
- fast, whole-buffer DEFLATE-based compression and decompression
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- dep: libhtscodecs2 (>= 1.3.0)
- Custom compression for CRAM and others
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- dep: liblzma5 (>= 5.1.1alpha+20120614)
- XZ 格式压缩库
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- dep: libssl3t64 (>= 3.0.0)
- 安全套接字层工具箱 - 共享库
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- dep: zlib1g (>= 1:1.1.4)
- 压缩库 - 运行时