[ 源代码： tree-puzzle ]
软件包：tree-puzzle-doc（5.2-11）
Reconstruction of phylogenetic trees by maximum likelihood (doc)
TREE-PUZZLE (the new name for PUZZLE) is an interactive console program that implements a fast tree search algorithm, quartet puzzling, that allows analysis of large data sets and automatically assigns estimations of support to each internal branch. TREE-PUZZLE also computes pairwise maximum likelihood distances as well as branch lengths for user specified trees. Branch lengths can also be calculated under the clock-assumption. In addition, TREE-PUZZLE offers a novel method, likelihood mapping, to investigate the support of a hypothesized internal branch without computing an overall tree and to visualize the phylogenetic content of a sequence alignment.
This is the documentation package for tree-puzzle
其他与 tree-puzzle-doc 有关的软件包
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- rec: tree-puzzle
- Reconstruction of phylogenetic trees by maximum likelihood
- 或者 tree-ppuzzle
- Parallelized reconstruction of phylogenetic trees by maximum likelihood