[ 源代码： r-cran-alakazam ]
软件包：r-cran-alakazam（1.1.0-1）
r-cran-alakazam 的相关链接
Debian 的资源：
下载源码包 r-cran-alakazam：
- [r-cran-alakazam_1.1.0-1.dsc]
- [r-cran-alakazam_1.1.0.orig.tar.gz]
- [r-cran-alakazam_1.1.0-1.debian.tar.xz]
维护小组：
外部的资源：
- 主页 [cran.r-project.org]
相似软件包：
Immunoglobulin Clonal Lineage and Diversity Analysis
Alakazam is part of the Immcantation analysis framework for Adaptive Immune Receptor Repertoire sequencing (AIRR-seq) and provides a set of tools to investigate lymphocyte receptor clonal lineages, diversity, gene usage, and other repertoire level properties, with a focus on high-throughput immunoglobulin (Ig) sequencing.
Alakazam serves five main purposes:
* Providing core functionality for other R packages in the Immcantation framework. This includes common tasks such as file I/O, basic DNA sequence manipulation, and interacting with V(D)J segment and gene annotations. * Providing an R interface for interacting with the output of the pRESTO and Change-O tool suites. * Performing lineage reconstruction on clonal populations of Ig sequences and analyzing the topology of the resultant lineage trees. * Performing clonal abundance and diversity analysis on lymphocyte repertoires. * Performing physicochemical property analyses of lymphocyte receptor sequences.
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