软件包：khmer（2.1.2+dfsg-8）

[ 源代码： khmer  ]

in-memory DNA sequence kmer counting, filtering & graph traversal

khmer is a library and suite of command line tools for working with DNA sequence. It is primarily aimed at short-read sequencing data such as that produced by the Illumina platform. khmer takes a k-mer-centric approach to sequence analysis, hence the name.

标签: 生物学: Fasta/Pearson, 核酸, 领域: field::biology, field::biology:bioinformatics, 实做语言: implemented-in::c++, implemented-in::python, 用户接口: 命令行, 角色: role::program, use::analysing, Purpose: 比较, Filtering

其他与 khmer 有关的软件包

• dep: cython3 (>= 0.26.1)

  C-Extensions for Python 3

• dep: khmer-common

  common files for the khmer project tools

• dep: libbz2-1.0

  高品质块排序文件压缩程序库 - 运行时库

• dep: libc6 (>= 2.29)

  GNU C 语言运行库：共享库
  同时作为一个虚包由这些包填实： libc6-udeb

• dep: libgcc-s1 (>= 3.0) [arm64]

  GCC 支持库

  dep: libgcc-s1 (>= 3.4) [amd64]

• dep: libgomp1 (>= 4.9)

  GCC OpenMP（GOMP）支持库

• dep: libstdc++6 (>= 5.2)

  GNU 标准 C++ 库，第3版

• dep: python3

  交互式高级面向对象语言（默认 python3 版本）

  dep: python3 (<< 3.10)

  dep: python3 (>= 3.9~)

• dep: python3-bz2file

  Python3 library for reading and writing bzip2-compressed files

• dep: python3-screed (>= 1.0)

  short nucleotide read sequence utils in Python 3

• dep: zlib1g (>= 1:1.2.3.4)

  压缩库 - 运行时

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硬件架构	软件包大小	安装后大小	文件
amd64	6,586.5 kB	29,785.0 kB	[文件列表]
arm64	6,491.9 kB	29,482.0 kB	[文件列表]