[ 源代码： r-bioc-edaseq ]
软件包：r-bioc-edaseq（2.32.0+dfsg-2）
r-bioc-edaseq 的相关链接
Debian 的资源：
下载源码包 r-bioc-edaseq：
- [r-bioc-edaseq_2.32.0+dfsg-2.dsc]
- [r-bioc-edaseq_2.32.0+dfsg.orig.tar.xz]
- [r-bioc-edaseq_2.32.0+dfsg-2.debian.tar.xz]
维护小组：
外部的资源：
- 主页 [bioconductor.org]
相似软件包：
GNU R exploratory data analysis and normalization for RNA-Seq
Numerical and graphical summaries of RNA-Seq read data. Within-lane normalization procedures to adjust for GC-content effect (or other gene-level effects) on read counts: loess robust local regression, global-scaling, and full-quantile normalization (Risso et al., 2011). Between-lane normalization procedures to adjust for distributional differences between lanes (e.g., sequencing depth): global-scaling and full-quantile normalization (Bullard et al., 2010).
其他与 r-bioc-edaseq 有关的软件包
|
|
|
|
-
- dep: r-api-4.0
- 本虚包由这些包填实： r-base-core
-
- dep: r-api-bioc-3.16
- 本虚包由这些包填实： r-bioc-biocgenerics
-
- dep: r-base-core (>= 4.2.2.20221110-1)
- GNU R core of statistical computation and graphics system
-
- dep: r-bioc-annotationdbi
- GNU R Annotation Database Interface for BioConductor
-
- dep: r-bioc-aroma.light
- BioConductor methods normalization and visualization of microarray data
-
- dep: r-bioc-biobase (>= 2.15.1)
- base functions for Bioconductor
-
- dep: r-bioc-biocgenerics
- generic functions for Bioconductor
-
- dep: r-bioc-biomart
- GNU R Interface to BioMart databases (Ensembl, COSMIC, Wormbase and Gramene)
-
- dep: r-bioc-biostrings
- GNU R string objects representing biological sequences
-
- dep: r-bioc-genomicfeatures
- GNU R tools for making and manipulating transcript centric annotations
-
- dep: r-bioc-genomicranges
- BioConductor representation and manipulation of genomic intervals
-
- dep: r-bioc-iranges (>= 1.13.9)
- GNU R low-level containers for storing sets of integer ranges
-
- dep: r-bioc-rsamtools (>= 1.5.75)
- GNU R binary alignment (BAM), variant call (BCF), or tabix file import
-
- dep: r-bioc-shortread (>= 1.11.42)
- GNU R classes and methods for high-throughput short-read sequencing data
-
- dep: r-cran-biocmanager
- access the Bioconductor project package repository
-
- sug: r-bioc-biocstyle
- standard styles for vignettes and other Bioconductor documents
-
- sug: r-bioc-deseq2
- R package for RNA-Seq Differential Expression Analysis
-
- sug: r-bioc-edger
- Empirical analysis of digital gene expression data in R
-
- sug: r-cran-kernsmooth
- GNU R package for kernel smoothing and density estimation
-
- sug: r-cran-knitr
- GNU R package for dynamic report generation using Literate Programming
-
- sug: r-cran-rmarkdown
- convert R markdown documents into a variety of formats
-
- sug: r-cran-testthat
- GNU R testsuite