Пакунок: r-bioc-edaseq (2.32.0+dfsg-2)
Links for r-bioc-edaseq
Debian Resources:
Download Source Package r-bioc-edaseq:
- [r-bioc-edaseq_2.32.0+dfsg-2.dsc]
- [r-bioc-edaseq_2.32.0+dfsg.orig.tar.xz]
- [r-bioc-edaseq_2.32.0+dfsg-2.debian.tar.xz]
Maintainers:
External Resources:
- Homepage [bioconductor.org]
Similar packages:
GNU R exploratory data analysis and normalization for RNA-Seq
Numerical and graphical summaries of RNA-Seq read data. Within-lane normalization procedures to adjust for GC-content effect (or other gene-level effects) on read counts: loess robust local regression, global-scaling, and full-quantile normalization (Risso et al., 2011). Between-lane normalization procedures to adjust for distributional differences between lanes (e.g., sequencing depth): global-scaling and full-quantile normalization (Bullard et al., 2010).
Інші пакунки пов'язані з r-bioc-edaseq
|
|
|
|
-
- dep: r-api-4.0
- virtual package provided by r-base-core
-
- dep: r-api-bioc-3.16
- virtual package provided by r-bioc-biocgenerics
-
- dep: r-base-core (>= 4.2.2.20221110-1)
- GNU R core of statistical computation and graphics system
-
- dep: r-bioc-annotationdbi
- GNU R Annotation Database Interface for BioConductor
-
- dep: r-bioc-aroma.light
- BioConductor methods normalization and visualization of microarray data
-
- dep: r-bioc-biobase (>= 2.15.1)
- base functions for Bioconductor
-
- dep: r-bioc-biocgenerics
- generic functions for Bioconductor
-
- dep: r-bioc-biomart
- GNU R Interface to BioMart databases (Ensembl, COSMIC, Wormbase and Gramene)
-
- dep: r-bioc-biostrings
- GNU R string objects representing biological sequences
-
- dep: r-bioc-genomicfeatures
- GNU R tools for making and manipulating transcript centric annotations
-
- dep: r-bioc-genomicranges
- BioConductor representation and manipulation of genomic intervals
-
- dep: r-bioc-iranges (>= 1.13.9)
- GNU R low-level containers for storing sets of integer ranges
-
- dep: r-bioc-rsamtools (>= 1.5.75)
- GNU R binary alignment (BAM), variant call (BCF), or tabix file import
-
- dep: r-bioc-shortread (>= 1.11.42)
- GNU R classes and methods for high-throughput short-read sequencing data
-
- dep: r-cran-biocmanager
- access the Bioconductor project package repository
-
- sug: r-bioc-biocstyle
- standard styles for vignettes and other Bioconductor documents
-
- sug: r-bioc-deseq2
- R package for RNA-Seq Differential Expression Analysis
-
- sug: r-bioc-edger
- Empirical analysis of digital gene expression data in R
-
- sug: r-cran-kernsmooth
- GNU R package for kernel smoothing and density estimation
-
- sug: r-cran-knitr
- GNU R package for dynamic report generation using Literate Programming
-
- sug: r-cran-rmarkdown
- convert R markdown documents into a variety of formats
-
- sug: r-cran-testthat
- GNU R testsuite
Завантажити r-bioc-edaseq
Архітектура | Розмір пакунка | Розмір після встановлення | Файли |
---|---|---|---|
all | 364.9 kB | 514.0 kB | [список файлів] |