[ 源代码: megadepth ]
软件包:megadepth(1.2.0-4)
computes coverage from BigWig and BAM sequencing files
A major concern for the interpretation of DNA and RNA (!) sequencing is the number of reads that cover a particular area. This package has interesting statistics for the distinction of coding and non-coding parts of the genome and knows how to interpret transcripts that span multiple exons.
This package is a successor of the program 'bamcount'.
其他与 megadepth 有关的软件包
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- dep: libbigwig0 (>= 0.4.6+dfsg)
- C library for handling bigWig files
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- dep: libc6 (>= 2.4)
- GNU C 语言运行库:共享库
同时作为一个虚包由这些包填实: libc6-udeb
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- dep: libgcc-s1 (>= 4.2)
- GCC 支持库
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- dep: libhts3 (>= 1.10)
- C library for high-throughput sequencing data formats
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- dep: libstdc++6 (>= 11)
- GNU 标准 C++ 库,第3版
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- sug: r-bioc-megadepth
- BioCOnductor BigWig and BAM related utilities