[ Källkod: megadepth ]
Paket: megadepth (1.2.0-4)
Länkar för megadepth
Debianresurser:
Hämta källkodspaketet megadepth:
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Externa resurser:
- Hemsida [github.com]
Liknande paket:
computes coverage from BigWig and BAM sequencing files
A major concern for the interpretation of DNA and RNA (!) sequencing is the number of reads that cover a particular area. This package has interesting statistics for the distinction of coding and non-coding parts of the genome and knows how to interpret transcripts that span multiple exons.
This package is a successor of the program 'bamcount'.
Andra paket besläktade med megadepth
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- dep: libbigwig0 (>= 0.4.6+dfsg)
- C library for handling bigWig files
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- dep: libc6 (>= 2.4)
- GNU C-bibliotek: Delade bibliotek
också ett virtuellt paket som tillhandahålls av libc6-udeb
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- dep: libgcc-s1 (>= 4.2)
- GCC stödbibliotek
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- dep: libhts3 (>= 1.10)
- C library for high-throughput sequencing data formats
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- dep: libstdc++6 (>= 11)
- GNU standardbibliotek v3 för C++
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- sug: r-bioc-megadepth
- BioCOnductor BigWig and BAM related utilities
Hämta megadepth
Arkitektur | Paketstorlek | Installerad storlek | Filer |
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i386 | 81,1 kbyte | 273,0 kbyte | [filförteckning] |