Paket: megadepth (1.2.0-4)

[ Källkod: megadepth  ]

computes coverage from BigWig and BAM sequencing files

A major concern for the interpretation of DNA and RNA (!) sequencing is the number of reads that cover a particular area. This package has interesting statistics for the distinction of coding and non-coding parts of the genome and knows how to interpret transcripts that span multiple exons.

This package is a successor of the program 'bamcount'.

Andra paket besläktade med megadepth

• dep: libbigwig0 (>= 0.4.6+dfsg)

  C library for handling bigWig files

• dep: libc6 (>= 2.4)

  GNU C-bibliotek: Delade bibliotek
  också ett virtuellt paket som tillhandahålls av libc6-udeb

• dep: libgcc-s1 (>= 4.2)

  GCC stödbibliotek

• dep: libhts3 (>= 1.10)

  C library for high-throughput sequencing data formats

• dep: libstdc++6 (>= 11)

  GNU standardbibliotek v3 för C++

• sug: r-bioc-megadepth

  BioCOnductor BigWig and BAM related utilities

Hämta megadepth

Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Paketstorlek	Installerad storlek	Filer
i386	81,1 kbyte	273,0 kbyte	[filförteckning]