软件包：bandage（0.9.0-2）

[ 源代码： bandage  ]

Bioinformatics Application for Navigating De novo Assembly Graphs Easily

Bandage is a GUI program that allows users to interact with the assembly graphs made by de novo assemblers such as Velvet, SPAdes, MEGAHIT and others.

De novo assembly graphs contain not only assembled contigs but also the connections between those contigs, which were previously not easily accessible. Bandage visualises assembly graphs, with connections, using graph layout algorithms. Nodes in the drawn graph, which represent contigs, can be automatically labelled with their ID, length or depth. Users can interact with the graph by moving, labelling and colouring nodes. Sequence information can also be extracted directly from the graph viewer. By displaying connections between contigs, Bandage opens up new possibilities for analysing and improving de novo assemblies that are not possible by looking at contigs alone.

More information and download links are on the Bandage website: rrwick.github.io/Bandage

The package is relevant to the field of genome assembly.

标签: 界面工具箱: Qt

其他与 bandage 有关的软件包

• dep: libc6 (>= 2.34)

  GNU C 语言运行库：共享库
  同时作为一个虚包由这些包填实： libc6-udeb

• dep: libgcc-s1 (>= 4.0) [除 arm64, mips64el]

  GCC 支持库

  dep: libgcc-s1 (>= 4.2) [arm64, mips64el]

• dep: libqt5core5a (>= 5.15.1)

  Qt 5 核心模块

• dep: libqt5gui5 (>= 5.8.0)

  Qt 5 GUI module

  或者 libqt5gui5-gles (>= 5.8.0)

  Qt 5 GUI module — OpenGL ES variant

• dep: libqt5svg5 (>= 5.6.0~beta)

  Qt 5 SVG module

• dep: libqt5widgets5 (>= 5.15.1)

  Qt 5 widgets 模块

• dep: libstdc++6 (>= 11)

  GNU 标准 C++ 库，第3版

下载 bandage

下载可用于所有硬件架构的

硬件架构	软件包大小	安装后大小	文件
amd64	948.0 kB	2,239.0 kB	[文件列表]
arm64	877.0 kB	2,145.0 kB	[文件列表]
armel	850.8 kB	2,012.0 kB	[文件列表]
armhf	854.4 kB	1,628.0 kB	[文件列表]
i386	981.9 kB	2,287.0 kB	[文件列表]
mips64el	897.8 kB	2,894.0 kB	[文件列表]
mipsel	900.4 kB	2,732.0 kB	[文件列表]
ppc64el	942.2 kB	2,654.0 kB	[文件列表]
s390x	878.4 kB	2,326.0 kB	[文件列表]