Package: bwa (0.7.17-7 and others)
Links for bwa
Debian Resources:
Download Source Package bwa:
Maintainers:
- Debian Med Packaging Team (QA Page, Mail Archive)
- Charles Plessy (QA Page)
- Andreas Tille (QA Page)
- Carlos Borroto (QA Page)
- Ognyan Kulev (QA Page)
- Michael R. Crusoe (QA Page)
External Resources:
- Homepage [bio-bwa.sourceforge.net]
Similar packages:
Burrows-Wheeler Aligner
BWA is a software package for mapping low-divergent sequences against a large reference genome, such as the human genome. It consists of three algorithms: BWA-backtrack, BWA-SW and BWA-MEM. The first algorithm is designed for Illumina sequence reads up to 100bp, while the rest two for longer sequences ranged from 70bp to 1Mbp. BWA-MEM and BWA-SW share similar features such as long-read support and split alignment, but BWA-MEM, which is the latest, is generally recommended for high-quality queries as it is faster and more accurate. BWA-MEM also has better performance than BWA-backtrack for 70-100bp Illumina reads.
Other Packages Related to bwa
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- dep: libc6 (>= 2.34)
- GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
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- dep: zlib1g (>= 1:1.1.4)
- compression library - runtime
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- rec: perl
- Larry Wall's Practical Extraction and Report Language
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- sug: samtools
- processing sequence alignments in SAM, BAM and CRAM formats
Download bwa
Architecture | Version | Package Size | Installed Size | Files |
---|---|---|---|---|
ppc64el | 0.7.17-7+b4 | 224.5 kB | 576.0 kB | [list of files] |