Paket: yaha (0.1.83-3 ve diğerleri)

[ Kaynak: yaha  ]

find split-read mappings on single-end queries

yaha is an open source, flexible, sensitive and accurate DNA aligner designed for single-end reads. It supports three major modes of operation:

 * The default “Optimal Query Coverage” (-OQC) mode reports the
   best set of alignments that cover the length of each query.
 * Using “Filter By Similarity” (-FBS), along with the best set of
   alignments, yaha will also output alignments that are highly similar
   to an alignment in the best set.
 * Finally, yaha can output all the alignments found for each query.

The -OQC and -FBS modes are specifically tuned to form split read mappings that can be used to accurately identify structural variation events (deletions, duplications, insertions or inversions) between the subject query and the reference genome.

yaha ile İlgili Diğer Paketler

• dep: libc6 (>= 2.17) [ppc64el]

  GNU C Library: Shared libraries
  ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

  dep: libc6 (>= 2.34) [arm64, riscv64]

  dep: libc6 (>= 2.4) [arm64, ppc64el, riscv64 değil]

• dep: libgcc-s1 (>= 3.5) [armel, armhf]

  GCC support library

yaha indir

Tüm mevcut mimariler için indir

Mimari	Sürüm	Paket Boyutu	Kurulu Boyut	Dosyalar
amd64	0.1.83-3	43,0 kB	109,0 kB	[dosya listesi]
arm64	0.1.83-3+b1	40,6 kB	146,0 kB	[dosya listesi]
armel	0.1.83-3	36,1 kB	92,0 kB	[dosya listesi]
armhf	0.1.83-3	36,2 kB	72,0 kB	[dosya listesi]
i386	0.1.83-3	46,2 kB	116,0 kB	[dosya listesi]
mips64el	0.1.83-3	46,3 kB	129,0 kB	[dosya listesi]
ppc64el	0.1.83-3	48,7 kB	145,0 kB	[dosya listesi]
riscv64	0.1.83-3+b1	44,3 kB	94,0 kB	[dosya listesi]
s390x	0.1.83-3	41,5 kB	113,0 kB	[dosya listesi]