Paket: fastml (3.11-4 ve diğerleri)

[ Kaynak: fastml  ]

maximum likelihood ancestral amino-acid sequence reconstruction

FastML is a bioinformatics tool for the reconstruction of ancestral sequences based on the phylogenetic relations between homologous sequences. FastML runs several algorithms that reconstruct the ancestral sequences with emphasis on an accurate reconstruction of both indels and characters. For character reconstruction the previously described FastML algorithms are used to efficiently infer the most likely ancestral sequences for each internal node of the tree. Both joint and the marginal reconstructions are provided. For indels reconstruction the sequences are first coded according to the indel events detected within the multiple sequence alignment (MSA) and then a state-of-the-art likelihood model is used to reconstruct ancestral indels states. The results are the most probable sequences, together with posterior probabilities for each character and indel at each sequence position for each internal node of the tree. FastML is generic and is applicable for any type of molecular sequences (nucleotide, protein, or codon sequences).

fastml ile İlgili Diğer Paketler

• dep: libc6 (>= 2.34) [arm64 değil]

  GNU C Library: Shared libraries
  ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

  dep: libc6 (>= 2.38) [arm64]

• dep: libgcc-s1 (>= 3.0) [armel, armhf, ppc64el, riscv64 değil]

  GCC support library

  dep: libgcc-s1 (>= 3.4) [riscv64]

  dep: libgcc-s1 (>= 3.4.4) [ppc64el]

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libstdc++6 (>= 13.1)

  GNU Standard C++ Library v3

fastml indir

Tüm mevcut mimariler için indir

Mimari	Sürüm	Paket Boyutu	Kurulu Boyut	Dosyalar
amd64	3.11-4	925,6 kB	3.474,0 kB	[dosya listesi]
arm64	3.11-4+b1	806,9 kB	3.355,0 kB	[dosya listesi]
armel	3.11-4	771,6 kB	3.195,0 kB	[dosya listesi]
armhf	3.11-4	769,9 kB	2.187,0 kB	[dosya listesi]
i386	3.11-4	939,9 kB	3.547,0 kB	[dosya listesi]
mips64el	3.11-4	768,4 kB	4.153,0 kB	[dosya listesi]
ppc64el	3.11-4	880,4 kB	4.058,0 kB	[dosya listesi]
riscv64	3.11-4	880,2 kB	2.502,0 kB	[dosya listesi]
s390x	3.11-4	913,6 kB	3.634,0 kB	[dosya listesi]