Paket: unifrac-tools (1.4-3 ve diğerleri)

[ Kaynak: unifrac-tools  ]

high-performance phylogenetic diversity calculations (binaries)

The de facto repository for high-performance phylogenetic diversity calculations. The methods in this repository are based on an implementation of the Strided State UniFrac algorithm which is faster, and uses less memory than Fast UniFrac. Strided State UniFrac supports Unweighted UniFrac, Weighted UniFrac, Generalized UniFrac, Variance Adjusted UniFrac and meta UniFrac. This repository also includes Stacked Faith (manuscript in preparation), a method for calculating Faith's PD that is faster and uses less memory than the Fast UniFrac-based reference implementation.

This package contains target binaries ssu and faithpd

unifrac-tools ile İlgili Diğer Paketler

• dep: libblas3

  Basic Linear Algebra Reference implementations, shared library

  ya da libblas.so.3

  sanal paketi sağlayan libblas3, libblis4-openmp, libblis4-pthread, libblis4-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial

• dep: libc6 (>= 2.38)

  GNU C Library: Shared libraries
  ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

• dep: libcurl4t64 (>= 7.16.2)

  easy-to-use client-side URL transfer library (OpenSSL flavour)

• dep: libgcc-s1 (>= 3.5)

  GCC support library

• dep: libgomp1 (>= 6)

  GCC OpenMP (GOMP) support library

• dep: liblapacke (>= 3.12.0)

  Library of linear algebra routines 3 - C lib shared version

• dep: liblz4-1 (>= 0.0~r130)

  Fast LZ compression algorithm library - runtime

• dep: libssl3t64 (>= 3.0.0)

  Secure Sockets Layer toolkit - shared libraries

• dep: libssu0

  high-performance phylogenetic diversity calculations (lib)

• dep: libstdc++6 (>= 14)

  GNU Standard C++ Library v3

• dep: libsz2 (>= 1.1.3)

  Adaptive Entropy Coding library - SZIP

• dep: zlib1g (>= 1:1.2.0)

  compression library - runtime

unifrac-tools indir

Tüm mevcut mimariler için indir

Mimari	Sürüm	Paket Boyutu	Kurulu Boyut	Dosyalar
armel	1.4-3+b4	1.555,5 kB	9.556,0 kB	[dosya listesi]