Paket: beagle (220722-1)

[ Kaynak: beagle  ]

Genotype calling, genotype phasing and imputation of ungenotyped markers

Beagle performs genotype calling, genotype phasing, imputation of ungenotyped markers, and identity-by-descent segment detection. Genotypic imputation works on phased haplotypes using a Li and Stephens haplotype frequency model. Beagle also implements the Refined IBD algorithm for detecting homozygosity-by-descent (HBD) and identity-by-descent (IBD) segments.

Etiketler: Alan: Biyoloji, Biyoinformatik, Geliştirildiği dil: implemented-in::java, interface::commandline, Rol: Program, Amaç: Analiz

beagle ile İlgili Diğer Paketler

• dep: default-jre

  Standard Java or Java compatible Runtime

  ya da java11-runtime

  sanal paketi sağlayan default-jre, openjdk-11-jre, openjdk-17-jre, openjdk-19-jre, openjdk-20-jre, openjdk-21-jre, openjdk-22-jre, openjdk-23-jre

• dep: libhtsjdk-java

  Java API for high-throughput sequencing data (HTS) formats

• sug: beagle-doc

  Documentation for Beagle

beagle indir

Tüm mevcut mimariler için indir

Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
all	352,8 kB	732,0 kB	[dosya listesi]