Paket: r-cran-spp (1.16.0-2) [debports]

[ Kaynak:  ]

GNU R ChIP-seq processing pipeline

R package for anlaysis of ChIP-seq and other functional sequencing data

 * Assess overall DNA-binding signals in the data and select appropriate
   quality of tag alignment.
 * Discard or restrict positions with abnormally high number of tags.
 * Calculate genome-wide profiles of smoothed tag density and save them
   in WIG files for viewing in other browsers.
 * Calculate genome-wide profiles providing conservative statistical
   estimates of fold enrichment ratios along the genome. These can be
   exported for browser viewing, or thresholded to determine regions of
   significant enrichment/depletion.
 * Determine statistically significant point binding positions
 * Assess whether the set of point binding positions detected at a
   current sequencing depth meets saturation criteria, and if does not,
   estimate what sequencing depth would be required to do so.

r-cran-spp ile İlgili Diğer Paketler

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• dep: libc6.1 (>= 2.31)

  GNU C Library: Shared libraries
  ayrıca şunun tarafından sağlanan bir sanal paket libc6.1-udeb

• dep: libgcc-s1 (>= 4.2)

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• dep: libstdc++6 (>= 5.2)

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• dep: libunwind8

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• dep: r-api-4.0

  sanal paketi sağlayan r-base-core

• dep: r-base-core (>= 4.0.2-1)

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• dep: r-bioc-rsamtools

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• dep: r-cran-bh (>= 1.66)

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• dep: r-cran-catools

  GNU R package providing various utility functions

• dep: r-cran-rcpp

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• dep: zlib1g (>= 1:1.1.4)

  compression library - runtime

r-cran-spp indir

Tüm mevcut mimariler için indir

Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
ia64 (resmi olmayan port)	332,4 kB	597,0 kB	[dosya listesi]