Paket: python3-bx (0.13.0-1) [debports]

[ Kaynak:  ]

library to manage genomic data and its alignment

The bx-python project is a Python3 library and associated set of scripts to allow for rapid implementation of genome scale analyses. The library contains a variety of useful modules, but the particular strengths are:

 * Classes for reading and working with genome-scale multiple local
   alignments (in MAF, AXT, and LAV formats)
 * Generic data structure for indexing on disk files that contain blocks of
   data associated with intervals on various sequences (used, for example, to
   provide random access to individual alignments in huge files; optimized
   for use over network filesystems)
 * Data structures for working with intervals on sequences
 * "Binned bitsets" which act just like chromosome sized bit arrays, but
   lazily allocate regions and allow large blocks of all set or all unset
   bits to be stored compactly
 * "Intersecter" for performing fast intersection tests that preserve both
   query and target intervals and associated annotation

python3-bx ile İlgili Diğer Paketler

• dep: libc6 (>= 2.11)

  GNU C Library: Shared libraries
  ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

• dep: python3

  interactive high-level object-oriented language (default python3 version)

  dep: python3 (<< 3.13)

  dep: python3 (>= 3.12~)

• dep: python3-lzo

  Python bindings for the LZO data compression library (Python 3)

• dep: python3-numpy (>= 1:1.25.0)

  Fast array facility to the Python language (Python 3)

• dep: python3-numpy-abi9

  sanal paketi sağlayan python3-numpy

• dep: python3-pyparsing

  alternative to creating and executing simple grammars - Python 3.x

• dep: zlib1g (>= 1:1.1.4)

  compression library - runtime

python3-bx indir

Tüm mevcut mimariler için indir

Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
hppa (resmi olmayan port)	627,2 kB	3.312,0 kB	[dosya listesi]