Paket: miniasm (0.3+dfsg-4) [debports]

[ Kaynak:  ]

ultrafast de novo assembler for long noisy DNA sequencing reads

Miniasm is an experimental very fast OLC-based de novo assembler for noisy long reads. It takes all-vs-all read self-mappings (typically by minimap) as input and outputs an assembly graph in the GFA format. Different from mainstream assemblers, miniasm does not have a consensus step. It simply concatenates pieces of read sequences to generate the final unitig sequences. Thus the per-base error rate is similar to the raw input reads.

miniasm ile İlgili Diğer Paketler

• dep: libc6.1 (>= 2.27)

  GNU C Library: Shared libraries
  ayrıca şunun tarafından sağlanan bir sanal paket libc6.1-udeb

• dep: zlib1g (>= 1:1.1.4)

  compression library - runtime

• rec: minimap

  tool for approximate mapping of long biosequences such as DNA reads

miniasm indir

Tüm mevcut mimariler için indir

Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
alpha (resmi olmayan port)	31,2 kB	83,0 kB	[dosya listesi]