Paket: snakemake (5.4.0-1)

[ Kaynak: snakemake  ]

pythonic workflow management system

Build systems like GNU Make are frequently used to create complicated workflows, e.g. in bioinformatics. This project aims to reduce the complexity of creating workflows by providing a clean and modern domain specific language (DSL) in Python style, together with a fast and comfortable execution environment.

snakemake ile İlgili Diğer Paketler

• dep: ca-certificates

  Common CA certificates

• dep: libjs-d3

  JavaScript visualization library for HTML and SVG

• dep: libjs-mathjax

  JavaScript display engine for LaTeX and MathML

• dep: libjs-sphinxdoc (>= 1.0)

  JavaScript support for Sphinx documentation

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: python3-appdirs

  determining appropriate platform-specific directories (Python 3)

• dep: python3-configargparse

  replacement for argparse with config files and environment variables (Python 3)

• dep: python3-datrie

  Super-fast, efficiently stored Trie for Python 3

• dep: python3-docutils

  text processing system for reStructuredText (implemented in Python 3)

• dep: python3-git

  Python library to interact with Git repositories - Python 3.x

• dep: python3-jsonschema

  An(other) implementation of JSON Schema (Draft 3 and 4) - Python 3.x

• dep: python3-networkx

  tool to create, manipulate and study complex networks (Python3)

• dep: python3-psutil

  module providing convenience functions for managing processes (Python3)

• dep: python3-pygraphviz

  Python interface to the Graphviz graph layout and visualization package (Python 3)

• dep: python3-pytools

  big bag of things supplementing Python 3 standard library

• dep: python3-ratelimiter

  simple Python library for limiting the rate of operations

• dep: python3-recommonmark

  CommonMark utility for Docutils and Sphinx projects -- Python 3

• dep: python3-requests

  elegant and simple HTTP library for Python3, built for human beings

• dep: python3-rpy2

  Python3 interface to the GNU R language and environment (version 2)

• dep: python3-setuptools

  Python3 Distutils Enhancements

• dep: python3-wrapt

  decorators, wrappers and monkey patching. - Python 3.x

• dep: python3-yaml

  YAML parser and emitter for Python3

• dep: sphinx-rtd-theme-common (>= 0.4.2+dfsg)

  sphinx theme from readthedocs.org (common files)

• rec: python3-boto

  Python interface to Amazon's Web Services - Python 3.x

• rec: r-cran-rmarkdown

  convert R markdown documents into a variety of formats

snakemake indir

Tüm mevcut mimariler için indir

Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
all	700,1 kB	3.547,0 kB	[dosya listesi]