Paket: python-cyvcf2 (0.10.4-1)

[ Kaynak: cyvcf2  ]

VCF parser based on htslib (Python 2)

This modules allows fast parsing of VCF and BCF including region-queries with Python. This is essential for efficient analyses of nucleotide variation with Python on high-throughput sequencing data.

cyvcf2 is a cython wrapper around htslib. Attributes like variant.gt_ref_depths return a numpy array directly so they are immediately ready for downstream use.

This package installs the library for Python 2.

python-cyvcf2 ile İlgili Diğer Paketler

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• dep: libc6 (>= 2.7)

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• dep: libcurl3-gnutls (>= 7.16.2)

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• dep: libhts2 (>= 1.2.1)

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• dep: libssl1.1 (>= 1.1.0)

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• dep: python-numpy (>= 1:1.16.0~rc1)

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• dep: python-numpy-abi9

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• dep: zlib1g (>= 1:1.1.4)

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• sug: python-cyvcf2-doc

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Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
armhf	755,7 kB	4.310,0 kB	[dosya listesi]