Paket: bio-vcf (0.9.5-2)

[ Kaynak: bio-vcf  ]

domain specific language (DSL) for processing the VCF format

Bio-vcf provides a domain specific language (DSL) for processing the VCF format. Record named fields can be queried with regular expressions, e.g.

 sample.dp>20 and rec.filter !~ /LowQD/ and rec.tumor.bcount[rec.alt]>4

Bio-vcf is a new generation VCF parser, filter and converter. Bio-vcf is not only very fast for genome-wide (WGS) data, it also comes with a really nice filtering, evaluation and rewrite language and it can output any type of textual data, including VCF header and contents in RDF and JSON.

bio-vcf ile İlgili Diğer Paketler

• dep: ruby

  Interpreter of object-oriented scripting language Ruby (default version)

  ya da ruby-interpreter

  Paket mevcut değil

bio-vcf indir

Tüm mevcut mimariler için indir

Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
all	25,1 kB	119,0 kB	[dosya listesi]