Paket: cufflinks (2.2.1+dfsg.1-8 ve diğerleri) [non-free]

[ Kaynak: cufflinks  ]

Transcript assembly, differential expression and regulation for RNA-Seq

Cufflinks assembles transcripts, estimates their abundances, and tests for differential expression and regulation in RNA-Seq samples. It accepts aligned RNA-Seq reads and assembles the alignments into a parsimonious set of transcripts. Cufflinks then estimates the relative abundances of these transcripts based on how many reads support each one.

Etiketler: Biyoloji: Nükleik Asitler, Alan: Biyoloji, field::biology:bioinformatics, implemented-in::c++, Rol: Program, Şununla çalışır: Biyolojik Dizi

cufflinks ile İlgili Diğer Paketler

• dep: libboost-serialization1.74.0 (>= 1.74.0)

  serialization library for C++

• dep: libboost-thread1.74.0 (>= 1.74.0)

  portable C++ multi-threading

• dep: libc6 (>= 2.29)

  GNU C Library: Shared libraries
  ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

• dep: libgcc-s1 (>= 4.5)

  GCC support library

• dep: libstdc++6 (>= 5.2)

  GNU Standard C++ Library v3

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: zlib1g (>= 1:1.2.3.3)

  compression library - runtime

• rec: gffread

  GFF/GTF format conversions, region filtering, FASTA sequence extraction

• enh: tophat

  Paket mevcut değil

cufflinks indir

Tüm mevcut mimariler için indir

Mimari	Sürüm	Paket Boyutu	Kurulu Boyut	Dosyalar
arm64	2.2.1+dfsg.1-8+b1	1.390,1 kB	9.869,0 kB	[dosya listesi]