snakemake paketinin all bullseye dosya listesi
/usr/bin/snakemake /usr/bin/snakemake-bash-completion /usr/lib/python3/dist-packages/snakemake-5.24.1.egg-info/PKG-INFO /usr/lib/python3/dist-packages/snakemake-5.24.1.egg-info/dependency_links.txt /usr/lib/python3/dist-packages/snakemake-5.24.1.egg-info/entry_points.txt /usr/lib/python3/dist-packages/snakemake-5.24.1.egg-info/not-zip-safe /usr/lib/python3/dist-packages/snakemake-5.24.1.egg-info/requires.txt /usr/lib/python3/dist-packages/snakemake-5.24.1.egg-info/top_level.txt /usr/lib/python3/dist-packages/snakemake/__init__.py /usr/lib/python3/dist-packages/snakemake/__main__.py /usr/lib/python3/dist-packages/snakemake/_version.py /usr/lib/python3/dist-packages/snakemake/benchmark.py /usr/lib/python3/dist-packages/snakemake/caching/__init__.py /usr/lib/python3/dist-packages/snakemake/caching/hash.py /usr/lib/python3/dist-packages/snakemake/caching/local.py /usr/lib/python3/dist-packages/snakemake/caching/remote.py /usr/lib/python3/dist-packages/snakemake/checkpoints.py /usr/lib/python3/dist-packages/snakemake/common.py /usr/lib/python3/dist-packages/snakemake/cwl.py /usr/lib/python3/dist-packages/snakemake/dag.py /usr/lib/python3/dist-packages/snakemake/decorators.py /usr/lib/python3/dist-packages/snakemake/deployment/__init__.py /usr/lib/python3/dist-packages/snakemake/deployment/conda.py /usr/lib/python3/dist-packages/snakemake/deployment/env_modules.py /usr/lib/python3/dist-packages/snakemake/deployment/singularity.py /usr/lib/python3/dist-packages/snakemake/exceptions.py /usr/lib/python3/dist-packages/snakemake/executors/__init__.py /usr/lib/python3/dist-packages/snakemake/executors/google_lifesciences.py /usr/lib/python3/dist-packages/snakemake/executors/google_lifesciences_helper.py /usr/lib/python3/dist-packages/snakemake/executors/jobscript.sh /usr/lib/python3/dist-packages/snakemake/gui.html /usr/lib/python3/dist-packages/snakemake/gui.py /usr/lib/python3/dist-packages/snakemake/io.py /usr/lib/python3/dist-packages/snakemake/jobs.py /usr/lib/python3/dist-packages/snakemake/linting/__init__.py /usr/lib/python3/dist-packages/snakemake/linting/links.py /usr/lib/python3/dist-packages/snakemake/linting/rules.py /usr/lib/python3/dist-packages/snakemake/linting/snakefiles.py /usr/lib/python3/dist-packages/snakemake/logging.py /usr/lib/python3/dist-packages/snakemake/notebook.py /usr/lib/python3/dist-packages/snakemake/output_index.py /usr/lib/python3/dist-packages/snakemake/parser.py /usr/lib/python3/dist-packages/snakemake/persistence.py /usr/lib/python3/dist-packages/snakemake/remote/AzBlob.py /usr/lib/python3/dist-packages/snakemake/remote/EGA.py /usr/lib/python3/dist-packages/snakemake/remote/FTP.py /usr/lib/python3/dist-packages/snakemake/remote/GS.py /usr/lib/python3/dist-packages/snakemake/remote/HTTP.py /usr/lib/python3/dist-packages/snakemake/remote/NCBI.py /usr/lib/python3/dist-packages/snakemake/remote/S3.py /usr/lib/python3/dist-packages/snakemake/remote/S3Mocked.py /usr/lib/python3/dist-packages/snakemake/remote/SFTP.py /usr/lib/python3/dist-packages/snakemake/remote/XRootD.py /usr/lib/python3/dist-packages/snakemake/remote/__init__.py /usr/lib/python3/dist-packages/snakemake/remote/dropbox.py /usr/lib/python3/dist-packages/snakemake/remote/gfal.py /usr/lib/python3/dist-packages/snakemake/remote/gridftp.py /usr/lib/python3/dist-packages/snakemake/remote/iRODS.py /usr/lib/python3/dist-packages/snakemake/remote/webdav.py /usr/lib/python3/dist-packages/snakemake/report.css /usr/lib/python3/dist-packages/snakemake/report/__init__.py /usr/lib/python3/dist-packages/snakemake/report/report.html /usr/lib/python3/dist-packages/snakemake/report/table.html /usr/lib/python3/dist-packages/snakemake/resources.py /usr/lib/python3/dist-packages/snakemake/rules.py /usr/lib/python3/dist-packages/snakemake/scheduler.py /usr/lib/python3/dist-packages/snakemake/script.py /usr/lib/python3/dist-packages/snakemake/shell.py /usr/lib/python3/dist-packages/snakemake/stats.py /usr/lib/python3/dist-packages/snakemake/utils.py /usr/lib/python3/dist-packages/snakemake/workflow.py /usr/lib/python3/dist-packages/snakemake/wrapper.py /usr/share/doc-base/snakemake /usr/share/doc/snakemake/changelog.Debian.gz /usr/share/doc/snakemake/changelog.gz /usr/share/doc/snakemake/copyright /usr/share/doc/snakemake/examples/c/README.txt /usr/share/doc/snakemake/examples/c/include/hello.h /usr/share/doc/snakemake/examples/c/src/Makefile /usr/share/doc/snakemake/examples/c/src/Snakefile /usr/share/doc/snakemake/examples/c/src/dag.png /usr/share/doc/snakemake/examples/c/src/hello.c /usr/share/doc/snakemake/examples/c/src/hellofunc.c /usr/share/doc/snakemake/examples/cufflinks/Snakefile /usr/share/doc/snakemake/examples/cufflinks/dag.png /usr/share/doc/snakemake/examples/cufflinks/dag.svg /usr/share/doc/snakemake/examples/cufflinks/hg19.fa /usr/share/doc/snakemake/examples/cufflinks/hg19.gtf /usr/share/doc/snakemake/examples/cufflinks/mapped/101.bam /usr/share/doc/snakemake/examples/cufflinks/mapped/102.bam /usr/share/doc/snakemake/examples/cufflinks/mapped/103.bam /usr/share/doc/snakemake/examples/cufflinks/mapped/104.bam /usr/share/doc/snakemake/examples/hello-world/Snakefile /usr/share/doc/snakemake/examples/hello-world/config.yaml /usr/share/doc/snakemake/examples/hello-world/envs/matplotlib.yaml /usr/share/doc/snakemake/examples/hello-world/envs/xsv.yaml /usr/share/doc/snakemake/examples/hello-world/scripts/plot-hist.py /usr/share/doc/snakemake/examples/idea/idea.pdf /usr/share/doc/snakemake/examples/idea/idea.png /usr/share/doc/snakemake/examples/idea/idea.svg /usr/share/doc/snakemake/examples/latex/Snakefile /usr/share/doc/snakemake/examples/latex/dag.png /usr/share/doc/snakemake/examples/latex/document.tex /usr/share/doc/snakemake/examples/latex/fig1.pdf /usr/share/doc/snakemake/examples/latex/response-to-editor.tex /usr/share/doc/snakemake/examples/latex/tex.rules /usr/share/doc/snakemake/examples/mirna/dag.dot /usr/share/doc/snakemake/examples/mirna/dag.png /usr/share/doc/snakemake/html/_downloads/46b4e3eeb474847e7d97cd8817e9f8d8/custom-stylesheet.css /usr/share/doc/snakemake/html/_downloads/6960c3669caa5d0e2bab959ad718381c/report.html /usr/share/doc/snakemake/html/_images/dag_call.png /usr/share/doc/snakemake/html/_images/dag_index.png /usr/share/doc/snakemake/html/_images/idea.png /usr/share/doc/snakemake/html/_images/quals.svg /usr/share/doc/snakemake/html/_images/results-google-storage.png /usr/share/doc/snakemake/html/_images/snakemake-notebook-demo.gif /usr/share/doc/snakemake/html/_images/upload-google-storage.png /usr/share/doc/snakemake/html/_modules/index.html /usr/share/doc/snakemake/html/_modules/snakemake.html /usr/share/doc/snakemake/html/_modules/snakemake/benchmark.html /usr/share/doc/snakemake/html/_modules/snakemake/checkpoints.html /usr/share/doc/snakemake/html/_modules/snakemake/common.html /usr/share/doc/snakemake/html/_modules/snakemake/cwl.html /usr/share/doc/snakemake/html/_modules/snakemake/dag.html /usr/share/doc/snakemake/html/_modules/snakemake/decorators.html /usr/share/doc/snakemake/html/_modules/snakemake/exceptions.html /usr/share/doc/snakemake/html/_modules/snakemake/executors.html /usr/share/doc/snakemake/html/_modules/snakemake/gui.html /usr/share/doc/snakemake/html/_modules/snakemake/io.html /usr/share/doc/snakemake/html/_modules/snakemake/jobs.html /usr/share/doc/snakemake/html/_modules/snakemake/logging.html /usr/share/doc/snakemake/html/_modules/snakemake/output_index.html /usr/share/doc/snakemake/html/_modules/snakemake/parser.html /usr/share/doc/snakemake/html/_modules/snakemake/persistence.html /usr/share/doc/snakemake/html/_modules/snakemake/remote.html /usr/share/doc/snakemake/html/_modules/snakemake/remote/EGA.html /usr/share/doc/snakemake/html/_modules/snakemake/remote/HTTP.html /usr/share/doc/snakemake/html/_modules/snakemake/remote/NCBI.html /usr/share/doc/snakemake/html/_modules/snakemake/remote/S3.html /usr/share/doc/snakemake/html/_modules/snakemake/remote/dropbox.html /usr/share/doc/snakemake/html/_modules/snakemake/report.html /usr/share/doc/snakemake/html/_modules/snakemake/rules.html /usr/share/doc/snakemake/html/_modules/snakemake/scheduler.html /usr/share/doc/snakemake/html/_modules/snakemake/script.html /usr/share/doc/snakemake/html/_modules/snakemake/shell.html /usr/share/doc/snakemake/html/_modules/snakemake/stats.html /usr/share/doc/snakemake/html/_modules/snakemake/utils.html /usr/share/doc/snakemake/html/_modules/snakemake/workflow.html /usr/share/doc/snakemake/html/_modules/snakemake/wrapper.html /usr/share/doc/snakemake/html/_sources/api_reference/internal/modules.rst.txt /usr/share/doc/snakemake/html/_sources/api_reference/internal/snakemake.remote.rst.txt /usr/share/doc/snakemake/html/_sources/api_reference/internal/snakemake.report.rst.txt /usr/share/doc/snakemake/html/_sources/api_reference/internal/snakemake.rst.txt /usr/share/doc/snakemake/html/_sources/api_reference/snakemake.rst.txt /usr/share/doc/snakemake/html/_sources/api_reference/snakemake_utils.rst.txt /usr/share/doc/snakemake/html/_sources/executing/caching.rst.txt /usr/share/doc/snakemake/html/_sources/executing/cli.rst.txt /usr/share/doc/snakemake/html/_sources/executing/cloud.rst.txt /usr/share/doc/snakemake/html/_sources/executing/cluster.rst.txt /usr/share/doc/snakemake/html/_sources/executing/interoperability.rst.txt /usr/share/doc/snakemake/html/_sources/executor_tutorial/azure_aks.rst.txt /usr/share/doc/snakemake/html/_sources/executor_tutorial/google_lifesciences.rst.txt /usr/share/doc/snakemake/html/_sources/executor_tutorial/tutorial.rst.txt /usr/share/doc/snakemake/html/_sources/getting_started/installation.rst.txt /usr/share/doc/snakemake/html/_sources/index.rst.txt /usr/share/doc/snakemake/html/_sources/project_info/authors.rst.txt /usr/share/doc/snakemake/html/_sources/project_info/citations.rst.txt /usr/share/doc/snakemake/html/_sources/project_info/contributing.rst.txt /usr/share/doc/snakemake/html/_sources/project_info/faq.rst.txt /usr/share/doc/snakemake/html/_sources/project_info/history.rst.txt /usr/share/doc/snakemake/html/_sources/project_info/license.rst.txt /usr/share/doc/snakemake/html/_sources/project_info/more_resources.rst.txt /usr/share/doc/snakemake/html/_sources/snakefiles/configuration.rst.txt /usr/share/doc/snakemake/html/_sources/snakefiles/deployment.rst.txt /usr/share/doc/snakemake/html/_sources/snakefiles/modularization.rst.txt /usr/share/doc/snakemake/html/_sources/snakefiles/remote_files.rst.txt /usr/share/doc/snakemake/html/_sources/snakefiles/reporting.rst.txt /usr/share/doc/snakemake/html/_sources/snakefiles/rules.rst.txt /usr/share/doc/snakemake/html/_sources/snakefiles/utils.rst.txt /usr/share/doc/snakemake/html/_sources/snakefiles/writing_snakefiles.rst.txt /usr/share/doc/snakemake/html/_sources/tutorial/additional_features.rst.txt /usr/share/doc/snakemake/html/_sources/tutorial/advanced.rst.txt /usr/share/doc/snakemake/html/_sources/tutorial/basics.rst.txt /usr/share/doc/snakemake/html/_sources/tutorial/setup.rst.txt /usr/share/doc/snakemake/html/_sources/tutorial/short.rst.txt /usr/share/doc/snakemake/html/_sources/tutorial/tutorial.rst.txt /usr/share/doc/snakemake/html/_static/basic.css /usr/share/doc/snakemake/html/_static/css/badge_only.css /usr/share/doc/snakemake/html/_static/css/theme.css /usr/share/doc/snakemake/html/_static/doctools.js /usr/share/doc/snakemake/html/_static/documentation_options.js /usr/share/doc/snakemake/html/_static/file.png /usr/share/doc/snakemake/html/_static/fonts/Lato-Bold.ttf /usr/share/doc/snakemake/html/_static/fonts/Lato-Bold.woff2 /usr/share/doc/snakemake/html/_static/fonts/Lato-BoldItalic.ttf /usr/share/doc/snakemake/html/_static/fonts/Lato-BoldItalic.woff2 /usr/share/doc/snakemake/html/_static/fonts/Lato-Italic.ttf /usr/share/doc/snakemake/html/_static/fonts/Lato-Italic.woff2 /usr/share/doc/snakemake/html/_static/fonts/Lato-Regular.ttf /usr/share/doc/snakemake/html/_static/fonts/Lato-Regular.woff2 /usr/share/doc/snakemake/html/_static/fonts/RobotoSlab-Bold.woff2 /usr/share/doc/snakemake/html/_static/fonts/RobotoSlab-Regular.woff2 /usr/share/doc/snakemake/html/_static/fonts/fontawesome-webfont.eot /usr/share/doc/snakemake/html/_static/fonts/fontawesome-webfont.svg /usr/share/doc/snakemake/html/_static/fonts/fontawesome-webfont.ttf /usr/share/doc/snakemake/html/_static/fonts/fontawesome-webfont.woff /usr/share/doc/snakemake/html/_static/fonts/fontawesome-webfont.woff2 /usr/share/doc/snakemake/html/_static/jquery.js /usr/share/doc/snakemake/html/_static/js/theme.js /usr/share/doc/snakemake/html/_static/language_data.js /usr/share/doc/snakemake/html/_static/minus.png /usr/share/doc/snakemake/html/_static/plus.png /usr/share/doc/snakemake/html/_static/pygments.css /usr/share/doc/snakemake/html/_static/searchtools.js /usr/share/doc/snakemake/html/_static/sphinx-argparse.css /usr/share/doc/snakemake/html/_static/theme.css /usr/share/doc/snakemake/html/_static/underscore.js /usr/share/doc/snakemake/html/api_reference/internal/modules.html /usr/share/doc/snakemake/html/api_reference/internal/snakemake.html /usr/share/doc/snakemake/html/api_reference/internal/snakemake.remote.html /usr/share/doc/snakemake/html/api_reference/internal/snakemake.report.html /usr/share/doc/snakemake/html/api_reference/snakemake.html /usr/share/doc/snakemake/html/api_reference/snakemake_utils.html /usr/share/doc/snakemake/html/executing/caching.html /usr/share/doc/snakemake/html/executing/cli.html /usr/share/doc/snakemake/html/executing/cloud.html /usr/share/doc/snakemake/html/executing/cluster.html /usr/share/doc/snakemake/html/executing/interoperability.html /usr/share/doc/snakemake/html/executor_tutorial/azure_aks.html /usr/share/doc/snakemake/html/executor_tutorial/google_lifesciences.html /usr/share/doc/snakemake/html/executor_tutorial/tutorial.html /usr/share/doc/snakemake/html/genindex.html /usr/share/doc/snakemake/html/getting_started/installation.html /usr/share/doc/snakemake/html/index.html /usr/share/doc/snakemake/html/objects.inv /usr/share/doc/snakemake/html/project_info/authors.html /usr/share/doc/snakemake/html/project_info/citations.html /usr/share/doc/snakemake/html/project_info/contributing.html /usr/share/doc/snakemake/html/project_info/faq.html /usr/share/doc/snakemake/html/project_info/history.html /usr/share/doc/snakemake/html/project_info/license.html /usr/share/doc/snakemake/html/project_info/more_resources.html /usr/share/doc/snakemake/html/py-modindex.html /usr/share/doc/snakemake/html/search.html /usr/share/doc/snakemake/html/searchindex.js /usr/share/doc/snakemake/html/snakefiles/configuration.html /usr/share/doc/snakemake/html/snakefiles/deployment.html /usr/share/doc/snakemake/html/snakefiles/modularization.html /usr/share/doc/snakemake/html/snakefiles/remote_files.html /usr/share/doc/snakemake/html/snakefiles/reporting.html /usr/share/doc/snakemake/html/snakefiles/rules.html /usr/share/doc/snakemake/html/snakefiles/utils.html /usr/share/doc/snakemake/html/snakefiles/writing_snakefiles.html /usr/share/doc/snakemake/html/tutorial/additional_features.html /usr/share/doc/snakemake/html/tutorial/advanced.html /usr/share/doc/snakemake/html/tutorial/basics.html /usr/share/doc/snakemake/html/tutorial/setup.html /usr/share/doc/snakemake/html/tutorial/short.html /usr/share/doc/snakemake/html/tutorial/tutorial.html /usr/share/doc/snakemake/tests/common.py.gz /usr/share/doc/snakemake/tests/conftest.py /usr/share/doc/snakemake/tests/knapsack/Snakefile /usr/share/doc/snakemake/tests/linting/absolute_paths/negative.smk /usr/share/doc/snakemake/tests/linting/absolute_paths/positive.smk /usr/share/doc/snakemake/tests/linting/dynamic/negative.smk /usr/share/doc/snakemake/tests/linting/dynamic/positive.smk /usr/share/doc/snakemake/tests/linting/envvars/negative.smk /usr/share/doc/snakemake/tests/linting/envvars/positive.smk /usr/share/doc/snakemake/tests/linting/iofile_by_index/negative.smk /usr/share/doc/snakemake/tests/linting/iofile_by_index/positive.smk /usr/share/doc/snakemake/tests/linting/log_directive/negative.smk /usr/share/doc/snakemake/tests/linting/log_directive/positive.smk /usr/share/doc/snakemake/tests/linting/long_run/negative.smk /usr/share/doc/snakemake/tests/linting/long_run/positive.smk /usr/share/doc/snakemake/tests/linting/missing_software_definition/negative.smk /usr/share/doc/snakemake/tests/linting/missing_software_definition/positive.smk /usr/share/doc/snakemake/tests/linting/mixed_func_and_rules/common.smk /usr/share/doc/snakemake/tests/linting/mixed_func_and_rules/negative.smk /usr/share/doc/snakemake/tests/linting/mixed_func_and_rules/positive.smk /usr/share/doc/snakemake/tests/linting/not_used_params/config.yaml /usr/share/doc/snakemake/tests/linting/not_used_params/negative.smk /usr/share/doc/snakemake/tests/linting/not_used_params/positive.smk /usr/share/doc/snakemake/tests/linting/params_prefix/negative.smk /usr/share/doc/snakemake/tests/linting/params_prefix/positive.smk /usr/share/doc/snakemake/tests/linting/path_add/negative.smk /usr/share/doc/snakemake/tests/linting/path_add/positive.smk /usr/share/doc/snakemake/tests/linting/singularity/negative.smk /usr/share/doc/snakemake/tests/linting/singularity/positive.smk /usr/share/doc/snakemake/tests/linting/tab_usage/negative.smk /usr/share/doc/snakemake/tests/linting/tab_usage/positive.smk /usr/share/doc/snakemake/tests/linting/version/negative.smk /usr/share/doc/snakemake/tests/linting/version/positive.smk /usr/share/doc/snakemake/tests/profile/Snakefile /usr/share/doc/snakemake/tests/test (with parenthese's)/Snakefile /usr/share/doc/snakemake/tests/test (with parenthese's)/expected-results/test.out /usr/share/doc/snakemake/tests/test (with parenthese's)/test.in /usr/share/doc/snakemake/tests/test01/Snakefile /usr/share/doc/snakemake/tests/test01/expected-results/dir/test.out /usr/share/doc/snakemake/tests/test01/expected-results/test.inter /usr/share/doc/snakemake/tests/test01/test.in /usr/share/doc/snakemake/tests/test02/Snakefile /usr/share/doc/snakemake/tests/test02/expected-results/test.out /usr/share/doc/snakemake/tests/test02/test.in /usr/share/doc/snakemake/tests/test03/Snakefile /usr/share/doc/snakemake/tests/test03/expected-results/test.out /usr/share/doc/snakemake/tests/test03/params /usr/share/doc/snakemake/tests/test03/test.in /usr/share/doc/snakemake/tests/test04/Snakefile /usr/share/doc/snakemake/tests/test04/expected-results/test.out /usr/share/doc/snakemake/tests/test04/params /usr/share/doc/snakemake/tests/test04/test.in /usr/share/doc/snakemake/tests/test05/Snakefile /usr/share/doc/snakemake/tests/test05/expected-results/test.1.inter /usr/share/doc/snakemake/tests/test05/expected-results/test.1.inter2 /usr/share/doc/snakemake/tests/test05/expected-results/test.2.inter /usr/share/doc/snakemake/tests/test05/expected-results/test.2.inter2 /usr/share/doc/snakemake/tests/test05/expected-results/test.3.inter /usr/share/doc/snakemake/tests/test05/expected-results/test.3.inter2 /usr/share/doc/snakemake/tests/test05/expected-results/test.predictions /usr/share/doc/snakemake/tests/test05/test.in /usr/share/doc/snakemake/tests/test06/Snakefile /usr/share/doc/snakemake/tests/test06/expected-results/test.bla.out /usr/share/doc/snakemake/tests/test06/test.in /usr/share/doc/snakemake/tests/test07/Snakefile /usr/share/doc/snakemake/tests/test07/expected-results/test.out /usr/share/doc/snakemake/tests/test07/expected-results/test2.out /usr/share/doc/snakemake/tests/test07/test.in /usr/share/doc/snakemake/tests/test08/Snakefile /usr/share/doc/snakemake/tests/test08/expected-results/test.out /usr/share/doc/snakemake/tests/test08/expected-results/test2.out /usr/share/doc/snakemake/tests/test08/test.in /usr/share/doc/snakemake/tests/test08/test2.in /usr/share/doc/snakemake/tests/test09/Snakefile /usr/share/doc/snakemake/tests/test09/test.in /usr/share/doc/snakemake/tests/test10/Snakefile /usr/share/doc/snakemake/tests/test10/expected-results/test.out /usr/share/doc/snakemake/tests/test10/test.in /usr/share/doc/snakemake/tests/test11/Snakefile /usr/share/doc/snakemake/tests/test11/expected-results/test.inter /usr/share/doc/snakemake/tests/test11/expected-results/test.out /usr/share/doc/snakemake/tests/test11/import.snakefile /usr/share/doc/snakemake/tests/test11/test.in /usr/share/doc/snakemake/tests/test12/Snakefile /usr/share/doc/snakemake/tests/test12/expected-results/test.out /usr/share/doc/snakemake/tests/test12/test.in /usr/share/doc/snakemake/tests/test13/Snakefile /usr/share/doc/snakemake/tests/test13/expected-results/test.algo1-p7-improved.out /usr/share/doc/snakemake/tests/test13/expected-results/test.algo1-p7.out /usr/share/doc/snakemake/tests/test13/test.in /usr/share/doc/snakemake/tests/test14/Snakefile.nonstandard /usr/share/doc/snakemake/tests/test14/expected-results/test.1.inter /usr/share/doc/snakemake/tests/test14/expected-results/test.1.inter2 /usr/share/doc/snakemake/tests/test14/expected-results/test.2.inter /usr/share/doc/snakemake/tests/test14/expected-results/test.2.inter2 /usr/share/doc/snakemake/tests/test14/expected-results/test.3.inter /usr/share/doc/snakemake/tests/test14/expected-results/test.3.inter2 /usr/share/doc/snakemake/tests/test14/expected-results/test.predictions /usr/share/doc/snakemake/tests/test14/qsub /usr/share/doc/snakemake/tests/test14/qsub.py /usr/share/doc/snakemake/tests/test14/test.in /usr/share/doc/snakemake/tests/test15/Snakefile /usr/share/doc/snakemake/tests/test15/expected-results/test.out /usr/share/doc/snakemake/tests/test15/test.in /usr/share/doc/snakemake/tests/testHighWorkload/Snakefile /usr/share/doc/snakemake/tests/test_ancient/Snakefile /usr/share/doc/snakemake/tests/test_ancient/expected-results/C /usr/share/doc/snakemake/tests/test_ancient/expected-results/D /usr/share/doc/snakemake/tests/test_archive/Snakefile /usr/share/doc/snakemake/tests/test_archive/test-env.yaml /usr/share/doc/snakemake/tests/test_bash/Snakefile /usr/share/doc/snakemake/tests/test_bash/expected-results/test.out /usr/share/doc/snakemake/tests/test_batch/Snakefile /usr/share/doc/snakemake/tests/test_batch_final/Snakefile /usr/share/doc/snakemake/tests/test_benchmark/Snakefile /usr/share/doc/snakemake/tests/test_benchmark/script.py /usr/share/doc/snakemake/tests/test_checkpoints/Snakefile /usr/share/doc/snakemake/tests/test_checkpoints_dir/Snakefile /usr/share/doc/snakemake/tests/test_checkpoints_dir/expected-results/aggregated/a.txt /usr/share/doc/snakemake/tests/test_checkpoints_dir/expected-results/aggregated/b.txt /usr/share/doc/snakemake/tests/test_conda/Snakefile /usr/share/doc/snakemake/tests/test_conda/expected-results/test0.out /usr/share/doc/snakemake/tests/test_conda/expected-results/test1.out /usr/share/doc/snakemake/tests/test_conda/expected-results/test2.out /usr/share/doc/snakemake/tests/test_conda/test-env.yaml /usr/share/doc/snakemake/tests/test_conda_custom_prefix/Snakefile /usr/share/doc/snakemake/tests/test_conda_custom_prefix/expected-results/test0.out /usr/share/doc/snakemake/tests/test_conda_custom_prefix/expected-results/test1.out /usr/share/doc/snakemake/tests/test_conda_custom_prefix/expected-results/test2.out /usr/share/doc/snakemake/tests/test_conda_custom_prefix/test-env.yaml /usr/share/doc/snakemake/tests/test_conditional/Snakefile /usr/share/doc/snakemake/tests/test_config/Snakefile /usr/share/doc/snakemake/tests/test_config/test.json /usr/share/doc/snakemake/tests/test_config/test.rules /usr/share/doc/snakemake/tests/test_config/test2.json /usr/share/doc/snakemake/tests/test_config/test3.json /usr/share/doc/snakemake/tests/test_container/Snakefile /usr/share/doc/snakemake/tests/test_container/expected-results/test.out /usr/share/doc/snakemake/tests/test_convert_to_cwl/Snakefile /usr/share/doc/snakemake/tests/test_convert_to_cwl/test.in /usr/share/doc/snakemake/tests/test_core_dependent_threads/Snakefile /usr/share/doc/snakemake/tests/test_core_dependent_threads/expected-results/test.out /usr/share/doc/snakemake/tests/test_cwl/Snakefile /usr/share/doc/snakemake/tests/test_cwl/expected-results/sorted.txt /usr/share/doc/snakemake/tests/test_cwl/test.txt /usr/share/doc/snakemake/tests/test_default_remote/Snakefile /usr/share/doc/snakemake/tests/test_default_remote/test.txt /usr/share/doc/snakemake/tests/test_default_resources/Snakefile /usr/share/doc/snakemake/tests/test_default_resources/test.txt /usr/share/doc/snakemake/tests/test_deferred_func_eval/Snakefile /usr/share/doc/snakemake/tests/test_deferred_func_eval/expected-results/test.out /usr/share/doc/snakemake/tests/test_delete_all_output/Snakefile /usr/share/doc/snakemake/tests/test_delete_all_output/Snakefile_inner /usr/share/doc/snakemake/tests/test_delete_output/Snakefile /usr/share/doc/snakemake/tests/test_directory/Snakefile /usr/share/doc/snakemake/tests/test_dup_out_patterns/Snakefile /usr/share/doc/snakemake/tests/test_dynamic/Snakefile /usr/share/doc/snakemake/tests/test_dynamic_temp/Snakefile /usr/share/doc/snakemake/tests/test_dynamic_temp/test1.txt /usr/share/doc/snakemake/tests/test_dynamic_temp/test2.txt /usr/share/doc/snakemake/tests/test_empty_include/Snakefile /usr/share/doc/snakemake/tests/test_env_modules/Snakefile /usr/share/doc/snakemake/tests/test_env_modules/expected-results/test.out /usr/share/doc/snakemake/tests/test_env_modules/test-env-modules.sh /usr/share/doc/snakemake/tests/test_envvars/Snakefile /usr/share/doc/snakemake/tests/test_envvars/expected-results/test.out /usr/share/doc/snakemake/tests/test_envvars/expected-results/test2.out /usr/share/doc/snakemake/tests/test_expand.py /usr/share/doc/snakemake/tests/test_expand_flag/Snakefile /usr/share/doc/snakemake/tests/test_filegraph/Snakefile /usr/share/doc/snakemake/tests/test_format_params/Snakefile /usr/share/doc/snakemake/tests/test_format_params/expected-results/test.out /usr/share/doc/snakemake/tests/test_format_wildcards/Snakefile /usr/share/doc/snakemake/tests/test_format_wildcards/expected-results/foo.txt /usr/share/doc/snakemake/tests/test_ftp_immediate_close/Snakefile /usr/share/doc/snakemake/tests/test_ftp_immediate_close/expected-results/size.txt /usr/share/doc/snakemake/tests/test_get_log_both/Snakefile /usr/share/doc/snakemake/tests/test_get_log_both/expected-results/test.log /usr/share/doc/snakemake/tests/test_get_log_both/expected-results/test.out /usr/share/doc/snakemake/tests/test_get_log_both/test.in /usr/share/doc/snakemake/tests/test_get_log_both/wrapper.py /usr/share/doc/snakemake/tests/test_get_log_complex/Snakefile /usr/share/doc/snakemake/tests/test_get_log_complex/expected-results/test.log /usr/share/doc/snakemake/tests/test_get_log_complex/expected-results/test.out /usr/share/doc/snakemake/tests/test_get_log_complex/test.in /usr/share/doc/snakemake/tests/test_get_log_complex/wrapper.py /usr/share/doc/snakemake/tests/test_get_log_none/Snakefile /usr/share/doc/snakemake/tests/test_get_log_none/expected-results/test.out /usr/share/doc/snakemake/tests/test_get_log_none/test.in /usr/share/doc/snakemake/tests/test_get_log_none/wrapper.py /usr/share/doc/snakemake/tests/test_get_log_stderr/Snakefile /usr/share/doc/snakemake/tests/test_get_log_stderr/expected-results/test.log /usr/share/doc/snakemake/tests/test_get_log_stderr/expected-results/test.out /usr/share/doc/snakemake/tests/test_get_log_stderr/test.in /usr/share/doc/snakemake/tests/test_get_log_stderr/wrapper.py /usr/share/doc/snakemake/tests/test_get_log_stdout/Snakefile /usr/share/doc/snakemake/tests/test_get_log_stdout/expected-results/test.log /usr/share/doc/snakemake/tests/test_get_log_stdout/expected-results/test.out /usr/share/doc/snakemake/tests/test_get_log_stdout/test.in /usr/share/doc/snakemake/tests/test_get_log_stdout/wrapper.py /usr/share/doc/snakemake/tests/test_github_issue105/Snakefile /usr/share/doc/snakemake/tests/test_github_issue456/Snakefile /usr/share/doc/snakemake/tests/test_github_issue456/expected-results/test.txt /usr/share/doc/snakemake/tests/test_github_issue52/Snakefile /usr/share/doc/snakemake/tests/test_github_issue52/other.smk /usr/share/doc/snakemake/tests/test_github_issue78/Snakefile /usr/share/doc/snakemake/tests/test_github_issue78/expected-results/test_a.out /usr/share/doc/snakemake/tests/test_github_issue78/expected-results/test_b.out /usr/share/doc/snakemake/tests/test_github_issue78/expected-results/test_c.out /usr/share/doc/snakemake/tests/test_github_issue_14/Snakefile /usr/share/doc/snakemake/tests/test_github_issue_14/expected-results/pythonTest /usr/share/doc/snakemake/tests/test_github_issue_14/local_script.py /usr/share/doc/snakemake/tests/test_github_issue_14/pythonTest.py /usr/share/doc/snakemake/tests/test_globwildcards/Snakefile /usr/share/doc/snakemake/tests/test_google_lifesciences.py /usr/share/doc/snakemake/tests/test_google_lifesciences/Snakefile /usr/share/doc/snakemake/tests/test_google_lifesciences/config.json /usr/share/doc/snakemake/tests/test_google_lifesciences/env.yml /usr/share/doc/snakemake/tests/test_group_job_fail/Snakefile /usr/share/doc/snakemake/tests/test_group_jobs/Snakefile /usr/share/doc/snakemake/tests/test_group_jobs/qsub /usr/share/doc/snakemake/tests/test_gs_requester_pays/Snakefile /usr/share/doc/snakemake/tests/test_gs_requester_pays/expected-results/landsat-data.txt.gz /usr/share/doc/snakemake/tests/test_inoutput_is_path/Snakefile /usr/share/doc/snakemake/tests/test_inoutput_is_path/expected-results/test.out /usr/share/doc/snakemake/tests/test_inoutput_is_path/test.in /usr/share/doc/snakemake/tests/test_inoutput_is_path/test.out /usr/share/doc/snakemake/tests/test_input_generator/Snakefile /usr/share/doc/snakemake/tests/test_input_generator/expected-results/foo.out1 /usr/share/doc/snakemake/tests/test_input_generator/expected-results/foo.out2 /usr/share/doc/snakemake/tests/test_input_generator/expected-results/foo.out3 /usr/share/doc/snakemake/tests/test_input_generator/foo.1.in /usr/share/doc/snakemake/tests/test_input_generator/foo.2.in /usr/share/doc/snakemake/tests/test_input_generator/foo.3.in /usr/share/doc/snakemake/tests/test_io.py /usr/share/doc/snakemake/tests/test_issue1037/Snakefile /usr/share/doc/snakemake/tests/test_issue1037/qsub /usr/share/doc/snakemake/tests/test_issue1041/Snakefile /usr/share/doc/snakemake/tests/test_issue1041/expected-results/raw.split_0.txt /usr/share/doc/snakemake/tests/test_issue1041/expected-results/raw.split_1.txt /usr/share/doc/snakemake/tests/test_issue1041/expected-results/raw.split_2.txt /usr/share/doc/snakemake/tests/test_issue1046/Snakefile /usr/share/doc/snakemake/tests/test_issue1046/expected-results/test_report.html /usr/share/doc/snakemake/tests/test_issue1046/my_wrapper/wrapper.py /usr/share/doc/snakemake/tests/test_issue1083/Snakefile /usr/share/doc/snakemake/tests/test_issue1085/Snakefile /usr/share/doc/snakemake/tests/test_issue1092/Snakefile /usr/share/doc/snakemake/tests/test_issue1092/expected-results/aggregated.txt /usr/share/doc/snakemake/tests/test_issue1092/expected-results/aggregated.txt_WIN /usr/share/doc/snakemake/tests/test_issue1093/Snakefile /usr/share/doc/snakemake/tests/test_issue1093/condaenv.yaml /usr/share/doc/snakemake/tests/test_issue1093/expected-results/aggregated.txt /usr/share/doc/snakemake/tests/test_issue1281/Snakefile /usr/share/doc/snakemake/tests/test_issue1284/Snakefile /usr/share/doc/snakemake/tests/test_issue1284/expected-results/result.c1 /usr/share/doc/snakemake/tests/test_issue1284/expected-results/result.c2 /usr/share/doc/snakemake/tests/test_issue1284/expected-results/result.r1 /usr/share/doc/snakemake/tests/test_issue1284/expected-results/result.r2 /usr/share/doc/snakemake/tests/test_issue1284/expected-results/result.r3 /usr/share/doc/snakemake/tests/test_issue260/Snakefile /usr/share/doc/snakemake/tests/test_issue260/expected-results/output/done.txt /usr/share/doc/snakemake/tests/test_issue260/expected-results/output/result.n1 /usr/share/doc/snakemake/tests/test_issue260/expected-results/output/result.n2 /usr/share/doc/snakemake/tests/test_issue260/expected-results/output/result.n3 /usr/share/doc/snakemake/tests/test_issue328/Snakefile /usr/share/doc/snakemake/tests/test_issue381/Snakefile /usr/share/doc/snakemake/tests/test_issue471/Snakefile /usr/share/doc/snakemake/tests/test_issue471/expected-results/test1.2.out /usr/share/doc/snakemake/tests/test_issue584/Snakefile /usr/share/doc/snakemake/tests/test_issue584/expected-results/out1 /usr/share/doc/snakemake/tests/test_issue612/Snakefile /usr/share/doc/snakemake/tests/test_issue635/Snakefile /usr/share/doc/snakemake/tests/test_issue635/envs/rmarkdown.yaml /usr/share/doc/snakemake/tests/test_issue635/expected-results/report.html /usr/share/doc/snakemake/tests/test_issue635/input.txt /usr/share/doc/snakemake/tests/test_issue635/scripts/report.Rmd /usr/share/doc/snakemake/tests/test_issue805/Snakefile /usr/share/doc/snakemake/tests/test_issue805/expected-results/test.out /usr/share/doc/snakemake/tests/test_issue850/Snakefile /usr/share/doc/snakemake/tests/test_issue850/qsub /usr/share/doc/snakemake/tests/test_issue854/Snakefile /usr/share/doc/snakemake/tests/test_issue860/Snakefile /usr/share/doc/snakemake/tests/test_issue860/qsub /usr/share/doc/snakemake/tests/test_issue894/Snakefile /usr/share/doc/snakemake/tests/test_issue912/Snakefile /usr/share/doc/snakemake/tests/test_issue912/qsub /usr/share/doc/snakemake/tests/test_issue916/Snakefile /usr/share/doc/snakemake/tests/test_issue916/expected-results/pythonTest /usr/share/doc/snakemake/tests/test_issue916/local_script.py /usr/share/doc/snakemake/tests/test_issue916/pythonTest.py /usr/share/doc/snakemake/tests/test_issue930/Snakefile /usr/share/doc/snakemake/tests/test_issue930/qsub /usr/share/doc/snakemake/tests/test_issue956/Snakefile /usr/share/doc/snakemake/tests/test_issue956/expected-results/f_A.txt /usr/share/doc/snakemake/tests/test_issue956/expected-results/f_B.txt /usr/share/doc/snakemake/tests/test_issue958/Snakefile /usr/share/doc/snakemake/tests/test_job_properties/Snakefile /usr/share/doc/snakemake/tests/test_job_properties/qsub.py /usr/share/doc/snakemake/tests/test_jupyter_notebook/Notebook.ipynb /usr/share/doc/snakemake/tests/test_jupyter_notebook/Snakefile /usr/share/doc/snakemake/tests/test_jupyter_notebook/env.yaml /usr/share/doc/snakemake/tests/test_jupyter_notebook/expected-results/result_final.txt /usr/share/doc/snakemake/tests/test_jupyter_notebook/expected-results/result_intermediate.txt /usr/share/doc/snakemake/tests/test_keyword_list/Snakefile /usr/share/doc/snakemake/tests/test_kubernetes.py /usr/share/doc/snakemake/tests/test_kubernetes/README.md /usr/share/doc/snakemake/tests/test_kubernetes/Snakefile /usr/share/doc/snakemake/tests/test_kubernetes/envs/gzip.yaml /usr/share/doc/snakemake/tests/test_linting.py /usr/share/doc/snakemake/tests/test_list_untracked/Snakefile /usr/share/doc/snakemake/tests/test_list_untracked/Snakefile_inner /usr/share/doc/snakemake/tests/test_list_untracked/expected-results/leftover_files /usr/share/doc/snakemake/tests/test_list_untracked/expected-results/leftover_files_WIN /usr/share/doc/snakemake/tests/test_local_import/Snakefile /usr/share/doc/snakemake/tests/test_log_input/Snakefile /usr/share/doc/snakemake/tests/test_log_input/expected-results/test.a.txt /usr/share/doc/snakemake/tests/test_many_jobs/Snakefile /usr/share/doc/snakemake/tests/test_multiext/Snakefile /usr/share/doc/snakemake/tests/test_multiple_includes/Snakefile /usr/share/doc/snakemake/tests/test_multiple_includes/test_rule.smk /usr/share/doc/snakemake/tests/test_multiple_includes/test_second_rule.smk /usr/share/doc/snakemake/tests/test_multiple_includes/test_third_rule.smk /usr/share/doc/snakemake/tests/test_nonstr_params/Snakefile /usr/share/doc/snakemake/tests/test_omitfrom/Snakefile /usr/share/doc/snakemake/tests/test_output_file_cache/Snakefile /usr/share/doc/snakemake/tests/test_output_file_cache/cache/6250074792e6b1aa4d9fbd820673cc22fe30525099db88b6918fa513fb003a66 /usr/share/doc/snakemake/tests/test_output_file_cache/cache/695af872f8dc47c9acd2dd3ebec1caad623f7348dca2c38ef81df8acef58b4eb.out /usr/share/doc/snakemake/tests/test_output_file_cache/cache/695af872f8dc47c9acd2dd3ebec1caad623f7348dca2c38ef81df8acef58b4eb.out2 /usr/share/doc/snakemake/tests/test_output_file_cache/cache/fa466047205bfd2dc7fe1fcbd5ec3591e3c1c5f73e8c7112493092191af2bee8 /usr/share/doc/snakemake/tests/test_output_file_cache/expected-results/cache/13b6128773a87e3d14cac7fab4949705be33620855bc102f07cffdae63664ea1 /usr/share/doc/snakemake/tests/test_output_file_cache/expected-results/cache/c547ff53a86ac70fecf68cf675b774bd158027def062bb65892b2f4f1662bc0e.out /usr/share/doc/snakemake/tests/test_output_file_cache/expected-results/cache/fa466047205bfd2dc7fe1fcbd5ec3591e3c1c5f73e8c7112493092191af2bee8 /usr/share/doc/snakemake/tests/test_output_file_cache/expected-results/test.out /usr/share/doc/snakemake/tests/test_output_file_cache/expected-results/test2.out /usr/share/doc/snakemake/tests/test_output_file_cache/expected-results/test3.x.out /usr/share/doc/snakemake/tests/test_output_file_cache/expected-results/test3.y.out /usr/share/doc/snakemake/tests/test_output_file_cache_remote/Snakefile /usr/share/doc/snakemake/tests/test_output_file_cache_remote/expected-results/cache/13b6128773a87e3d14cac7fab4949705be33620855bc102f07cffdae63664ea1 /usr/share/doc/snakemake/tests/test_output_file_cache_remote/expected-results/cache/c547ff53a86ac70fecf68cf675b774bd158027def062bb65892b2f4f1662bc0e /usr/share/doc/snakemake/tests/test_output_file_cache_remote/expected-results/cache/fa466047205bfd2dc7fe1fcbd5ec3591e3c1c5f73e8c7112493092191af2bee8 /usr/share/doc/snakemake/tests/test_params/Snakefile /usr/share/doc/snakemake/tests/test_parser/Snakefile /usr/share/doc/snakemake/tests/test_pathlib/Snakefile /usr/share/doc/snakemake/tests/test_pathlib/existing_file.txt /usr/share/doc/snakemake/tests/test_pathlib/expected-results/outdir/function_unpacking/output_function_unpacking /usr/share/doc/snakemake/tests/test_pathlib/expected-results/outdir/log_dynamic /usr/share/doc/snakemake/tests/test_pathlib/expected-results/outdir/log_existing /usr/share/doc/snakemake/tests/test_pathlib/expected-results/outdir/log_function_unpacking /usr/share/doc/snakemake/tests/test_pathlib/expected-results/outdir/log_other_rule_output /usr/share/doc/snakemake/tests/test_pathlib/expected-results/outdir/log_protected /usr/share/doc/snakemake/tests/test_pathlib/expected-results/outdir/output_existing /usr/share/doc/snakemake/tests/test_pathlib/expected-results/outdir/output_other_rule_output_existing /usr/share/doc/snakemake/tests/test_pathlib/expected-results/outdir/output_protected /usr/share/doc/snakemake/tests/test_pathlib_missing_file/Snakefile /usr/share/doc/snakemake/tests/test_peppy/pep/config.yaml /usr/share/doc/snakemake/tests/test_peppy/pep/sample_table.csv /usr/share/doc/snakemake/tests/test_peppy/workflow/Snakefile /usr/share/doc/snakemake/tests/test_peppy/workflow/schemas/pep.yaml /usr/share/doc/snakemake/tests/test_persistent_dict/Snakefile /usr/share/doc/snakemake/tests/test_pipes/Snakefile /usr/share/doc/snakemake/tests/test_pipes/expected-results/test.0.out /usr/share/doc/snakemake/tests/test_pipes/expected-results/test.1.out /usr/share/doc/snakemake/tests/test_pipes2/Snakefile /usr/share/doc/snakemake/tests/test_pipes_fail/Snakefile /usr/share/doc/snakemake/tests/test_profile/Snakefile /usr/share/doc/snakemake/tests/test_profile/Snakefile.internal /usr/share/doc/snakemake/tests/test_profile/config.yaml /usr/share/doc/snakemake/tests/test_profile/workflow-config.yaml /usr/share/doc/snakemake/tests/test_protected_symlink_output/Snakefile /usr/share/doc/snakemake/tests/test_protected_symlink_output/expected-results/outfile /usr/share/doc/snakemake/tests/test_protected_symlink_output/expected-results/outlink /usr/share/doc/snakemake/tests/test_r_wrapper/Snakefile /usr/share/doc/snakemake/tests/test_r_wrapper/wrapper.R /usr/share/doc/snakemake/tests/test_remote/Snakefile /usr/share/doc/snakemake/tests/test_remote/expected-results/out.txt /usr/share/doc/snakemake/tests/test_remote/test.txt /usr/share/doc/snakemake/tests/test_remote_azure/README.md /usr/share/doc/snakemake/tests/test_remote_azure/Snakefile /usr/share/doc/snakemake/tests/test_remote_gs/Snakefile /usr/share/doc/snakemake/tests/test_remote_gs/expected-results/landsat-data.txt.gz /usr/share/doc/snakemake/tests/test_remote_gs/landsat-data.txt.gz /usr/share/doc/snakemake/tests/test_remote_http/Snakefile /usr/share/doc/snakemake/tests/test_remote_http/expected-results/landsat-data.txt.gz /usr/share/doc/snakemake/tests/test_remote_irods/.gitignore /usr/share/doc/snakemake/tests/test_remote_irods/Dockerfile /usr/share/doc/snakemake/tests/test_remote_irods/Makefile /usr/share/doc/snakemake/tests/test_remote_irods/README.md /usr/share/doc/snakemake/tests/test_remote_irods/Snakefile /usr/share/doc/snakemake/tests/test_remote_irods/Snakefile.local /usr/share/doc/snakemake/tests/test_remote_irods/expected-results/outfile /usr/share/doc/snakemake/tests/test_remote_irods/setup-data/.irodsA /usr/share/doc/snakemake/tests/test_remote_irods/setup-data/irods_environment.json /usr/share/doc/snakemake/tests/test_remote_irods/test-data/infile /usr/share/doc/snakemake/tests/test_remote_log/Snakefile /usr/share/doc/snakemake/tests/test_remote_log/expected-results/motoState.p /usr/share/doc/snakemake/tests/test_remote_ncbi/Snakefile /usr/share/doc/snakemake/tests/test_remote_ncbi/expected-results/sizes.txt /usr/share/doc/snakemake/tests/test_remote_ncbi_simple/Snakefile /usr/share/doc/snakemake/tests/test_remote_ncbi_simple/expected-results/sizes.txt /usr/share/doc/snakemake/tests/test_remote_sftp/Snakefile /usr/share/doc/snakemake/tests/test_remote_sftp/expected-results/readme.txt /usr/share/doc/snakemake/tests/test_report/.snakemake/metadata/ZmlnMS5zdmc= /usr/share/doc/snakemake/tests/test_report/.snakemake/metadata/ZmlnMi5wbmc= /usr/share/doc/snakemake/tests/test_report/.snakemake/metadata/dGVzdC40Lm91dA== /usr/share/doc/snakemake/tests/test_report/.snakemake/metadata/dGVzdC41Lm91dA== /usr/share/doc/snakemake/tests/test_report/.snakemake/metadata/dGVzdC42Lm91dA== /usr/share/doc/snakemake/tests/test_report/.snakemake/metadata/dGVzdC43Lm91dA== /usr/share/doc/snakemake/tests/test_report/.snakemake/metadata/dGVzdC44Lm91dA== /usr/share/doc/snakemake/tests/test_report/.snakemake/metadata/dGVzdC45Lm91dA== /usr/share/doc/snakemake/tests/test_report/.snakemake/metadata/dGVzdC4wLm91dA== /usr/share/doc/snakemake/tests/test_report/.snakemake/metadata/dGVzdC4xLm91dA== /usr/share/doc/snakemake/tests/test_report/.snakemake/metadata/dGVzdC4yLm91dA== /usr/share/doc/snakemake/tests/test_report/.snakemake/metadata/dGVzdC4zLm91dA== /usr/share/doc/snakemake/tests/test_report/.snakemake/metadata/dGVzdC5jc3Y= /usr/share/doc/snakemake/tests/test_report/.snakemake/metadata/dGVzdGRpcg== /usr/share/doc/snakemake/tests/test_report/Snakefile /usr/share/doc/snakemake/tests/test_report/custom-stylesheet.css /usr/share/doc/snakemake/tests/test_report/data/fig1.svg /usr/share/doc/snakemake/tests/test_report/data/fig2.png /usr/share/doc/snakemake/tests/test_report/envs/test.yaml /usr/share/doc/snakemake/tests/test_report/expected-results/report.html /usr/share/doc/snakemake/tests/test_report/fig1.svg /usr/share/doc/snakemake/tests/test_report/report/fig1.rst /usr/share/doc/snakemake/tests/test_report/report/fig2.rst /usr/share/doc/snakemake/tests/test_report/report/table.rst /usr/share/doc/snakemake/tests/test_report/report/testdir.rst /usr/share/doc/snakemake/tests/test_report/report/workflow.rst /usr/share/doc/snakemake/tests/test_report/test.csv.gz /usr/share/doc/snakemake/tests/test_report/testdir/1.txt /usr/share/doc/snakemake/tests/test_report/testdir/2.txt /usr/share/doc/snakemake/tests/test_report/testdir/3.txt /usr/share/doc/snakemake/tests/test_report/testmodel.fig2.png /usr/share/doc/snakemake/tests/test_report_zip/.snakemake/metadata/ZmlnMS5zdmc= /usr/share/doc/snakemake/tests/test_report_zip/.snakemake/metadata/ZmlnMi5wbmc= /usr/share/doc/snakemake/tests/test_report_zip/.snakemake/metadata/dGVzdC40Lm91dA== /usr/share/doc/snakemake/tests/test_report_zip/.snakemake/metadata/dGVzdC41Lm91dA== /usr/share/doc/snakemake/tests/test_report_zip/.snakemake/metadata/dGVzdC42Lm91dA== /usr/share/doc/snakemake/tests/test_report_zip/.snakemake/metadata/dGVzdC43Lm91dA== /usr/share/doc/snakemake/tests/test_report_zip/.snakemake/metadata/dGVzdC44Lm91dA== /usr/share/doc/snakemake/tests/test_report_zip/.snakemake/metadata/dGVzdC45Lm91dA== /usr/share/doc/snakemake/tests/test_report_zip/.snakemake/metadata/dGVzdC4wLm91dA== /usr/share/doc/snakemake/tests/test_report_zip/.snakemake/metadata/dGVzdC4xLm91dA== /usr/share/doc/snakemake/tests/test_report_zip/.snakemake/metadata/dGVzdC4yLm91dA== /usr/share/doc/snakemake/tests/test_report_zip/.snakemake/metadata/dGVzdC4zLm91dA== /usr/share/doc/snakemake/tests/test_report_zip/.snakemake/metadata/dGVzdC5jc3Y= /usr/share/doc/snakemake/tests/test_report_zip/.snakemake/metadata/dGVzdG1vZGVsLmZpZzIucG5n /usr/share/doc/snakemake/tests/test_report_zip/.snakemake/metadata/dGVzdGRpcg== /usr/share/doc/snakemake/tests/test_report_zip/Snakefile /usr/share/doc/snakemake/tests/test_report_zip/custom-stylesheet.css /usr/share/doc/snakemake/tests/test_report_zip/data/fig1.svg /usr/share/doc/snakemake/tests/test_report_zip/data/fig2.png /usr/share/doc/snakemake/tests/test_report_zip/envs/test.yaml /usr/share/doc/snakemake/tests/test_report_zip/expected-results/report.zip /usr/share/doc/snakemake/tests/test_report_zip/fig1.svg /usr/share/doc/snakemake/tests/test_report_zip/report/fig1.rst /usr/share/doc/snakemake/tests/test_report_zip/report/fig2.rst /usr/share/doc/snakemake/tests/test_report_zip/report/table.rst /usr/share/doc/snakemake/tests/test_report_zip/report/testdir.rst /usr/share/doc/snakemake/tests/test_report_zip/report/workflow.rst /usr/share/doc/snakemake/tests/test_report_zip/test.csv.gz /usr/share/doc/snakemake/tests/test_report_zip/testdir/1.txt /usr/share/doc/snakemake/tests/test_report_zip/testdir/2.txt /usr/share/doc/snakemake/tests/test_report_zip/testdir/3.txt /usr/share/doc/snakemake/tests/test_report_zip/testmodel.fig2.png /usr/share/doc/snakemake/tests/test_restartable_job_cmd_exit_1/Snakefile /usr/share/doc/snakemake/tests/test_restartable_job_cmd_exit_1/expected-results/.done /usr/share/doc/snakemake/tests/test_restartable_job_cmd_exit_1/qsub /usr/share/doc/snakemake/tests/test_restartable_job_cmd_exit_1/qsub.py /usr/share/doc/snakemake/tests/test_restartable_job_qsub_exit_1/Snakefile /usr/share/doc/snakemake/tests/test_restartable_job_qsub_exit_1/qsub /usr/share/doc/snakemake/tests/test_restartable_job_qsub_exit_1/qsub.log /usr/share/doc/snakemake/tests/test_restartable_job_qsub_exit_1/qsub.py /usr/share/doc/snakemake/tests/test_rule_defined_in_for_loop/Snakefile /usr/share/doc/snakemake/tests/test_ruledag/Snakefile /usr/share/doc/snakemake/tests/test_ruledeps/Snakefile /usr/share/doc/snakemake/tests/test_run_namedlist/Snakefile /usr/share/doc/snakemake/tests/test_same_wildcard/Snakefile /usr/share/doc/snakemake/tests/test_same_wildcard/expected-results/test_test.out /usr/share/doc/snakemake/tests/test_same_wildcard/test_test.in /usr/share/doc/snakemake/tests/test_schema.py /usr/share/doc/snakemake/tests/test_script/Snakefile /usr/share/doc/snakemake/tests/test_script/config.yaml /usr/share/doc/snakemake/tests/test_script/envs/julia.yaml /usr/share/doc/snakemake/tests/test_script/envs/r.yaml /usr/share/doc/snakemake/tests/test_script/expected-results/julia.out /usr/share/doc/snakemake/tests/test_script/expected-results/rel_source.out /usr/share/doc/snakemake/tests/test_script/expected-results/test.html /usr/share/doc/snakemake/tests/test_script/expected-results/test.in /usr/share/doc/snakemake/tests/test_script/expected-results/test.out /usr/share/doc/snakemake/tests/test_script/scripts/rel_source.R /usr/share/doc/snakemake/tests/test_script/scripts/source_me.R /usr/share/doc/snakemake/tests/test_script/scripts/test.R /usr/share/doc/snakemake/tests/test_script/scripts/test.Rmd /usr/share/doc/snakemake/tests/test_script/scripts/test.jl /usr/share/doc/snakemake/tests/test_script/scripts/test.py /usr/share/doc/snakemake/tests/test_script_py/Snakefile /usr/share/doc/snakemake/tests/test_script_py/config.yaml /usr/share/doc/snakemake/tests/test_script_py/expected-results/test.out /usr/share/doc/snakemake/tests/test_script_py/scripts/test.py /usr/share/doc/snakemake/tests/test_shadow/Snakefile /usr/share/doc/snakemake/tests/test_shadow/expected-results/simple_full.out /usr/share/doc/snakemake/tests/test_shadow/expected-results/simple_minimal.out /usr/share/doc/snakemake/tests/test_shadow/expected-results/simple_shallow.out /usr/share/doc/snakemake/tests/test_shadow/test.in /usr/share/doc/snakemake/tests/test_shadow_prefix/Snakefile /usr/share/doc/snakemake/tests/test_shadow_prefix/expected-results/shadow_prefix /usr/share/doc/snakemake/tests/test_shadow_prefix/qsub /usr/share/doc/snakemake/tests/test_shadow_prefix/test.in /usr/share/doc/snakemake/tests/test_shell/Snakefile /usr/share/doc/snakemake/tests/test_shell/expected-results/test.out /usr/share/doc/snakemake/tests/test_shell/test.in /usr/share/doc/snakemake/tests/test_singularity/Snakefile /usr/share/doc/snakemake/tests/test_singularity/expected-results/test.out /usr/share/doc/snakemake/tests/test_singularity/script.py /usr/share/doc/snakemake/tests/test_singularity_conda/Snakefile /usr/share/doc/snakemake/tests/test_singularity_conda/expected-results/test.out /usr/share/doc/snakemake/tests/test_singularity_conda/test-env.yaml /usr/share/doc/snakemake/tests/test_spaces_in_fnames/Snakefile /usr/share/doc/snakemake/tests/test_spaces_in_fnames/qsub /usr/share/doc/snakemake/tests/test_speed/Snakefile /usr/share/doc/snakemake/tests/test_srcdir/Snakefile /usr/share/doc/snakemake/tests/test_srcdir/expected-results/test.out /usr/share/doc/snakemake/tests/test_srcdir/script.sh /usr/share/doc/snakemake/tests/test_static_remote/S3MockedForStaticTest.py.gz /usr/share/doc/snakemake/tests/test_static_remote/Snakefile /usr/share/doc/snakemake/tests/test_static_remote/expected-results/out1.txt /usr/share/doc/snakemake/tests/test_static_remote/expected-results/out2.txt /usr/share/doc/snakemake/tests/test_static_remote/out1.txt /usr/share/doc/snakemake/tests/test_static_remote/out2.txt /usr/share/doc/snakemake/tests/test_static_remote/test.txt /usr/share/doc/snakemake/tests/test_string_resources/Snakefile /usr/share/doc/snakemake/tests/test_string_resources/expected-results/test.txt /usr/share/doc/snakemake/tests/test_string_resources/expected-results/test2.txt /usr/share/doc/snakemake/tests/test_string_resources/qsub.py /usr/share/doc/snakemake/tests/test_subworkflow_config/Snakefile /usr/share/doc/snakemake/tests/test_subworkflow_config/environment.yml /usr/share/doc/snakemake/tests/test_subworkflow_config/sub.snake /usr/share/doc/snakemake/tests/test_subworkflows/Snakefile /usr/share/doc/snakemake/tests/test_subworkflows/expected-results/test.out /usr/share/doc/snakemake/tests/test_subworkflows/subconfig.yaml /usr/share/doc/snakemake/tests/test_symlink_temp/Snakefile /usr/share/doc/snakemake/tests/test_symlink_time_handling/Snakefile /usr/share/doc/snakemake/tests/test_symlink_time_handling/expected-results/time_diff.txt /usr/share/doc/snakemake/tests/test_temp/Snakefile /usr/share/doc/snakemake/tests/test_temp/qsub /usr/share/doc/snakemake/tests/test_temp_expand/Snakefile /usr/share/doc/snakemake/tests/test_threads/Snakefile /usr/share/doc/snakemake/tests/test_threads/expected-results/test.out /usr/share/doc/snakemake/tests/test_threads0/Snakefile /usr/share/doc/snakemake/tests/test_threads0/expected-results/test.out /usr/share/doc/snakemake/tests/test_tibanna.py /usr/share/doc/snakemake/tests/test_tibanna/README.md /usr/share/doc/snakemake/tests/test_tibanna/Snakefile /usr/share/doc/snakemake/tests/test_tibanna/cleanup.py /usr/share/doc/snakemake/tests/test_tibanna/config.json /usr/share/doc/snakemake/tests/test_tibanna/env.yml /usr/share/doc/snakemake/tests/test_tibanna/expected-results/.gitkeep /usr/share/doc/snakemake/tests/test_tibanna/scripts/step2.py /usr/share/doc/snakemake/tests/test_touch/Snakefile /usr/share/doc/snakemake/tests/test_unpack_dict/Snakefile /usr/share/doc/snakemake/tests/test_unpack_dict/expected-results/prefix.out1.txt /usr/share/doc/snakemake/tests/test_unpack_dict/expected-results/prefix.out2.txt /usr/share/doc/snakemake/tests/test_unpack_dict/prefix.in1.txt /usr/share/doc/snakemake/tests/test_unpack_dict/prefix.in2.txt /usr/share/doc/snakemake/tests/test_unpack_list/Snakefile /usr/share/doc/snakemake/tests/test_unpack_list/expected-results/prefix.out1.txt /usr/share/doc/snakemake/tests/test_unpack_list/expected-results/prefix.out2.txt /usr/share/doc/snakemake/tests/test_unpack_list/prefix.in1.txt /usr/share/doc/snakemake/tests/test_unpack_list/prefix.in2.txt /usr/share/doc/snakemake/tests/test_until/Snakefile /usr/share/doc/snakemake/tests/test_update_config/Snakefile /usr/share/doc/snakemake/tests/test_update_config/cp.rule /usr/share/doc/snakemake/tests/test_update_config/echo.rule /usr/share/doc/snakemake/tests/test_update_config/echo.yaml /usr/share/doc/snakemake/tests/test_update_config/expected-results/config.yaml /usr/share/doc/snakemake/tests/test_update_config/test.yaml /usr/share/doc/snakemake/tests/test_url_include/Snakefile /usr/share/doc/snakemake/tests/test_url_include/expected-results/test.1.inter /usr/share/doc/snakemake/tests/test_url_include/expected-results/test.1.inter2 /usr/share/doc/snakemake/tests/test_url_include/expected-results/test.2.inter /usr/share/doc/snakemake/tests/test_url_include/expected-results/test.2.inter2 /usr/share/doc/snakemake/tests/test_url_include/expected-results/test.3.inter /usr/share/doc/snakemake/tests/test_url_include/expected-results/test.3.inter2 /usr/share/doc/snakemake/tests/test_url_include/expected-results/test.predictions /usr/share/doc/snakemake/tests/test_url_include/test.in /usr/share/doc/snakemake/tests/test_validate/Snakefile /usr/share/doc/snakemake/tests/test_validate/config.fail.yaml /usr/share/doc/snakemake/tests/test_validate/config.schema.yaml /usr/share/doc/snakemake/tests/test_validate/config.yaml /usr/share/doc/snakemake/tests/test_validate/samples.schema.yaml /usr/share/doc/snakemake/tests/test_validate/samples.tsv /usr/share/doc/snakemake/tests/test_wildcard_count_ambiguity/Snakefile /usr/share/doc/snakemake/tests/test_wildcard_keyword/Snakefile /usr/share/doc/snakemake/tests/test_wildcard_keyword/expected-results/ambig.u.ous.txt /usr/share/doc/snakemake/tests/test_wildcard_keyword/expected-results/globalbar.txt /usr/share/doc/snakemake/tests/test_wildcard_keyword/expected-results/localbar.txt /usr/share/doc/snakemake/tests/test_wildcard_keyword/expected-results/stringbar.txt /usr/share/doc/snakemake/tests/test_wrapper/Snakefile /usr/share/doc/snakemake/tests/test_wrapper/expected-results/test.vcf.gz /usr/share/doc/snakemake/tests/test_wrapper/test.vcf /usr/share/doc/snakemake/tests/test_xrootd/Snakefile /usr/share/doc/snakemake/tests/test_yaml_config/Snakefile /usr/share/doc/snakemake/tests/test_yaml_config/test.yaml /usr/share/doc/snakemake/tests/testapi.py /usr/share/doc/snakemake/tests/tests.py.gz /usr/share/lintian/overrides/snakemake /usr/share/man/man1/snakemake.1.gz