Paket: libsnpeff-java (5.1+d+dfsg-3)
libsnpeff-java için bağlantılar
Debian Kaynakları:
- Hata Raporları
- Developer Information
- Debian Değişim Günlüğü
- Telif Hakkı Dosyası
- Debian Yama Takipçisi
snpeff Kaynak Paketini İndir:
Geliştiriciler:
- Debian Med Packaging Team (QA Sayfası, Posta Arşivi)
- Andreas Tille (QA Sayfası)
- Pierre Gruet (QA Sayfası)
Dış Kaynaklar:
- Ana Sayfa [pcingola.github.io]
Benzer paketler:
genetic variant annotation and effect prediction toolbox - lib
SnpEff is a variant annotation and effect prediction tool. It annotates and predicts the effects of variants on genes (such as amino acid changes).
The inputs are predicted variants (SNPs, insertions, deletions and MNPs). The input file is usually obtained as a result of a sequencing experiment, and it is usually in variant call format (VCF).
SnpEff analyzes the input variants. It annotates the variants and calculates the effects they produce on known genes (e.g. amino acid changes).
This package contains the library.
libsnpeff-java ile İlgili Diğer Paketler
|
|
|
|
-
- dep: junit5
- JUnit regression test framework for Java
-
- dep: libapfloat-java (>= 1.10.1)
- high performance arbitrary precision arithmetic library for Java
-
- dep: libbiojava6-java
- Java API to biological data and applications (version 6)
-
- dep: libcharts4j-java (>= 1.3)
- free, lightweight charts and graphs Java API
-
- dep: libcommons-cli-java (>= 1.5.0)
- Command line arguments and options parsing library
-
- dep: libcommons-codec-java (>= 1.15)
- encoder and decoders such as Base64 and hexadecimal codec
-
- dep: libcommons-io-java (>= 2.11.0)
- Common useful IO related classes
-
- dep: libcommons-math3-java (>= 3.6.1)
- Java lightweight mathematics and statistics components
-
- dep: libdistlib-java (>= 1.0)
- Java library of statistical distribution functions
-
- dep: libfreemarker-java
- template engine written in Java
-
- dep: libhtsjdk-java
- Java API for high-throughput sequencing data (HTS) formats
-
- dep: libtrove3-java
- high performance collections for java
-
- sug: libsnpeff-java-doc
- Documentation for Snp Effect
libsnpeff-java indir
Mimari | Paket Boyutu | Kurulu Boyut | Dosyalar |
---|---|---|---|
all | 2.099,5 kB | 19.874,0 kB | [dosya listesi] |