Paket: jellyfish1 (1.1.11-8)
jellyfish1 için bağlantılar
Debian Kaynakları:
- Hata Raporları
- Developer Information
- Debian Değişim Günlüğü
- Telif Hakkı Dosyası
- Debian Yama Takipçisi
jellyfish1 Kaynak Paketini İndir:
Geliştiriciler:
- Debian Med Packaging Team (QA Sayfası, Posta Arşivi)
- Shaun Jackman (QA Sayfası)
- Andreas Tille (QA Sayfası)
Dış Kaynaklar:
- Ana Sayfa [www.cbcb.umd.edu]
Benzer paketler:
count k-mers in DNA sequences
JELLYFISH is a tool for fast, memory-efficient counting of k-mers in DNA. A k-mer is a substring of length k, and counting the occurrences of all such substrings is a central step in many analyses of DNA sequence. JELLYFISH can count k-mers using an order of magnitude less memory and an order of magnitude faster than other k-mer counting packages by using an efficient encoding of a hash table and by exploiting the "compare-and-swap" CPU instruction to increase parallelism.
JELLYFISH is a command-line program that reads FASTA and multi-FASTA files containing DNA sequences. It outputs its k-mer counts in an binary format, which can be translated into a human-readable text format using the "jellyfish dump" command.
This is the latest version of the 1.x series of jellyfish which is used by some other applications that are not compatible with version 2.x which is provided inside the jellyfish package.
jellyfish1 ile İlgili Diğer Paketler
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- dep: libc6 (>= 2.33)
- GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb
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- dep: libgcc-s1 (>= 3.0)
- GCC support library
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- dep: libstdc++6 (>= 11)
- GNU Standard C++ Library v3
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- enh: kraken
- assigning taxonomic labels to short DNA sequences
jellyfish1 indir
Mimari | Paket Boyutu | Kurulu Boyut | Dosyalar |
---|---|---|---|
amd64 | 138,6 kB | 644,0 kB | [dosya listesi] |
arm64 | 127,2 kB | 684,0 kB | [dosya listesi] |
mips64el | 127,7 kB | 776,0 kB | [dosya listesi] |
ppc64el | 127,5 kB | 876,0 kB | [dosya listesi] |