transdecoder paketinin all bookworm dosya listesi

/usr/bin/TransDecoder.LongOrfs
/usr/bin/TransDecoder.Predict
/usr/lib/transdecoder/PerlLib/DelimParser.pm
/usr/lib/transdecoder/PerlLib/Fasta_reader.pm
/usr/lib/transdecoder/PerlLib/Fasta_retriever.pm
/usr/lib/transdecoder/PerlLib/GFF3_utils.pm
/usr/lib/transdecoder/PerlLib/Gene_obj.pm
/usr/lib/transdecoder/PerlLib/Gene_obj_indexer.pm
/usr/lib/transdecoder/PerlLib/Longest_orf.pm
/usr/lib/transdecoder/PerlLib/Nuc_translator.pm
/usr/lib/transdecoder/PerlLib/PWM.pm
/usr/lib/transdecoder/PerlLib/Pipeliner.pm
/usr/lib/transdecoder/PerlLib/Process_cmd.pm
/usr/lib/transdecoder/PerlLib/TiedHash.pm
/usr/lib/transdecoder/PerlLib/overlapping_nucs.ph
/usr/lib/transdecoder/TransDecoder.LongOrfs
/usr/lib/transdecoder/TransDecoder.Predict
/usr/lib/transdecoder/util/PWM/README.md
/usr/lib/transdecoder/util/PWM/__deprecated/build_atgPWM.pl
/usr/lib/transdecoder/util/PWM/__deprecated/build_pwm.pl
/usr/lib/transdecoder/util/PWM/__deprecated/optimize_atgPWM.pl
/usr/lib/transdecoder/util/PWM/__deprecated/optimize_atgPWM_+-.pl
/usr/lib/transdecoder/util/PWM/__deprecated/optimize_atgPWM_+-.predict.pl
/usr/lib/transdecoder/util/PWM/__deprecated/score_atgPWM.pl
/usr/lib/transdecoder/util/PWM/build_atgPWM_+-.pl
/usr/lib/transdecoder/util/PWM/compute_AUC.pl
/usr/lib/transdecoder/util/PWM/deplete_feature_noise.pl
/usr/lib/transdecoder/util/PWM/feature_scores_to_ROC.pl
/usr/lib/transdecoder/util/PWM/feature_scoring.+-.pl
/usr/lib/transdecoder/util/PWM/make_seqLogo.Rscript
/usr/lib/transdecoder/util/PWM/plot_ROC.Rscript
/usr/lib/transdecoder/util/PWM/simulate_feature_seq_from_PWM.pl
/usr/lib/transdecoder/util/__pwm_tests/cleanMe.sh
/usr/lib/transdecoder/util/__pwm_tests/longest_orfs.cds.top_longest_5000.nr80.gz
/usr/lib/transdecoder/util/__pwm_tests/pasa_assemblies.fasta.gz
/usr/lib/transdecoder/util/__pwm_tests/runMe.sh
/usr/lib/transdecoder/util/bin/.hidden
/usr/lib/transdecoder/util/cdna_alignment_orf_to_genome_orf.pl
/usr/lib/transdecoder/util/compute_base_probs.pl
/usr/lib/transdecoder/util/cufflinks_gtf_genome_to_cdna_fasta.pl
/usr/lib/transdecoder/util/cufflinks_gtf_to_alignment_gff3.pl
/usr/lib/transdecoder/util/cufflinks_gtf_to_bed.pl
/usr/lib/transdecoder/util/exclude_similar_proteins.pl
/usr/lib/transdecoder/util/extract_FL_subset.pl
/usr/lib/transdecoder/util/ffindex_resume.pl
/usr/lib/transdecoder/util/gene_list_to_gff.pl
/usr/lib/transdecoder/util/get_FL_accs.pl
/usr/lib/transdecoder/util/get_longest_ORF_per_transcript.pl
/usr/lib/transdecoder/util/get_top_longest_fasta_entries.pl
/usr/lib/transdecoder/util/gff3_file_to_bed.pl
/usr/lib/transdecoder/util/gff3_file_to_proteins.pl
/usr/lib/transdecoder/util/index_gff3_files_by_isoform.pl
/usr/lib/transdecoder/util/misc/__init__.py
/usr/lib/transdecoder/util/misc/get_FP_FN_scores.py
/usr/lib/transdecoder/util/misc/plot_indiv_seq_likelihood_profile.py
/usr/lib/transdecoder/util/misc/rpart_scores.Rscript
/usr/lib/transdecoder/util/misc/select_TD_orfs.py
/usr/lib/transdecoder/util/nr_ORFs_gff3.pl
/usr/lib/transdecoder/util/pfam_mpi.pbs
/usr/lib/transdecoder/util/pfam_runner.pl
/usr/lib/transdecoder/util/refine_hexamer_scores.pl
/usr/lib/transdecoder/util/remove_eclipsed_ORFs.pl
/usr/lib/transdecoder/util/score_CDS_likelihood_all_6_frames.pl
/usr/lib/transdecoder/util/select_best_ORFs_per_transcript.pl
/usr/lib/transdecoder/util/seq_n_baseprobs_to_loglikelihood_vals.pl
/usr/lib/transdecoder/util/start_codon_refinement.pl
/usr/lib/transdecoder/util/train_start_PWM.pl
/usr/lib/transdecoder/util/uri_unescape.pl
/usr/share/doc/transdecoder/changelog.Debian.gz
/usr/share/doc/transdecoder/changelog.gz
/usr/share/doc/transdecoder/copyright
/usr/share/man/man1/TransDecoder.LongOrfs.1.gz
/usr/share/man/man1/TransDecoder.Predict.1.gz