Paket: pbbamtools (2.4.0+dfsg-1 och andra)

[ Källkod: pbbam  ]

processing Pacific Biosciences binary alignment/map files

The BAM format is a binary, compressed, record-oriented container format for raw or aligned sequence reads. The associated SAM format is a text representation of the same data. The specifications for BAM/SAM are maintained by the SAM/BAM Format Specification Working Group.

PacBio-produced BAM files are fully compatible with the BAM specification, but makes use of the extensibility mechanisms of the BAM specification to encode PacBio-specific information.

This package provides command-line utilities for working with PacBio BAM files.

Andra paket besläktade med pbbamtools

• dep: libc6 (>= 2.34)

  GNU C-bibliotek: Delade bibliotek
  också ett virtuellt paket som tillhandahålls av libc6-udeb

• dep: libgcc-s1 (>= 3.0)

  GCC stödbibliotek

• dep: libhts3t64 (>= 1.17)

  C library for high-throughput sequencing data formats

• dep: libpbbam2.4.0 (= 2.4.0+dfsg-1+b4)

  Pacific Biosciences binary alignment/map (BAM) library

• dep: libpbcopper2.3.0 (>= 2.3.0+dfsg)

  data structures, algorithms, and utilities for C++ applications

• dep: libstdc++6 (>= 13.1)

  GNU standardbibliotek v3 för C++

• rec: samtools

  processing sequence alignments in SAM, BAM and CRAM formats

Hämta pbbamtools

Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Version	Paketstorlek	Installerad storlek	Filer
mips64el	2.4.0+dfsg-1+b4	120,7 kbyte	702,0 kbyte	[filförteckning]