Paket: pbbamtools (1.6.0+dfsg-2)

[ Källkod: pbbam  ]

processing Pacific Biosciences binary alignment/map files

The BAM format is a binary, compressed, record-oriented container format for raw or aligned sequence reads. The associated SAM format is a text representation of the same data. The specifications for BAM/SAM are maintained by the SAM/BAM Format Specification Working Group.

PacBio-produced BAM files are fully compatible with the BAM specification, but makes use of the extensibility mechanisms of the BAM specification to encode PacBio-specific information.

This package provides command-line utilities for working with PacBio BAM files.

Andra paket besläktade med pbbamtools

• dep: libc6 (>= 2.4)

  GNU C-bibliotek: Delade bibliotek
  också ett virtuellt paket som tillhandahålls av libc6-udeb

• dep: libgcc-s1 (>= 3.0)

  GCC stödbibliotek

• dep: libhts3 (>= 1.10)

  C library for high-throughput sequencing data formats

• dep: libpbbam1.6.0 (= 1.6.0+dfsg-2)

  Pacific Biosciences binary alignment/map (BAM) library

• dep: libpbcopper1.8.0 (>= 1.8.0+dfsg)

  data structures, algorithms, and utilities for C++ applications

• dep: libstdc++6 (>= 5.2)

  GNU standardbibliotek v3 för C++

• rec: samtools

  processing sequence alignments in SAM, BAM and CRAM formats

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Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Paketstorlek	Installerad storlek	Filer
mips64el	86,0 kbyte	369,0 kbyte	[filförteckning]