Paket: libssw0 (1.1-15 och andra) [debports]

[ Källkod:  ]

fast SIMD parallelized implementation of the Smith-Waterman algorithm

SSW is a fast implementation of the Smith-Waterman algorithm, which uses the Single-Instruction Multiple-Data (SIMD) instructions to parallelize the algorithm at the instruction level. SSW library provides an API that can be flexibly used by programs written in C, C++ and other languages. The library can do protein and genome alignment directly. Current version of this implementation is ~50 times faster than an ordinary Smith-Waterman. It can return the Smith-Waterman score, alignment location and traceback path (cigar) of the optimal alignment accurately; and return the sub-optimal alignment score and location heuristically.

Andra paket besläktade med libssw0

• dep: libc6 (>= 2.4)

  GNU C-bibliotek: Delade bibliotek
  också ett virtuellt paket som tillhandahålls av libc6-udeb

• dep: libgcc-s1 (>= 3.3.1)

  GCC stödbibliotek

• dep: libstdc++6 (>= 11)

  GNU standardbibliotek v3 för C++

• dep: zlib1g

  Kompressionsbibliotek - körtidspaket

Hämta libssw0

Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Version	Paketstorlek	Installerad storlek	Filer
sparc64 (inofficiell anpassning)	1.1-15+b1	23,8 kbyte	1.046,0 kbyte	[filförteckning]