Package: libssw0 (1.1-15 and others) [debports]

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fast SIMD parallelized implementation of the Smith-Waterman algorithm

SSW is a fast implementation of the Smith-Waterman algorithm, which uses the Single-Instruction Multiple-Data (SIMD) instructions to parallelize the algorithm at the instruction level. SSW library provides an API that can be flexibly used by programs written in C, C++ and other languages. The library can do protein and genome alignment directly. Current version of this implementation is ~50 times faster than an ordinary Smith-Waterman. It can return the Smith-Waterman score, alignment location and traceback path (cigar) of the optimal alignment accurately; and return the sub-optimal alignment score and location heuristically.

Other Packages Related to libssw0

• dep: libc6 (>= 2.4)

  GNU C könyvtár: megosztott könyvtárak
  also a virtual package provided by libc6-udeb

• dep: libgcc-s1 (>= 3.3.1)

  GCC támogató programkönyvtár

• dep: libstdc++6 (>= 11)

  GNU Standard C++ Library v3

• dep: zlib1g

  tömörítő könyvtár - futásidejű

Download libssw0

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
sparc64 (unofficial port)	1.1-15+b1	23.8 kB	1,046.0 kB	[list of files]