Paket: libbio-samtools-perl (1.43-5 och andra)

[ Källkod: libbio-samtools-perl  ]

Perl interface to SamTools library for DNA sequencing

Bio::SamTools provides a Perl interface to the libbam library for indexed and unindexed SAM/BAM sequence alignment databases. It provides support for retrieving information on individual alignments, read pairs, and alignment coverage information across large regions. It also provides callback functionality for calling SNPs and performing other base-by-base functions. Most operations are compatible with the BioPerl Bio::SeqFeatureI interface, allowing BAM files to be used as a backend to the GBrowse genome browser application.

Märken: Software Development: Perl Development, Bibliotek, Implemented in: implemented-in::c, implemented-in::perl, Role: Development Library, Shared Library

Andra paket besläktade med libbio-samtools-perl

• dep: libbio-perl-perl

  BioPerl core perl modules

• dep: libc6 (>= 2.34)

  GNU C-bibliotek: Delade bibliotek
  också ett virtuellt paket som tillhandahålls av libc6-udeb

• dep: perl (>= 5.40.0-6)

  Larry Wall's Practical Extraction and Report Language

• dep: perlapi-5.40.0

  virtuellt paket som tillhandahålls av perl-base

• dep: zlib1g (>= 1:1.2.3.3)

  Kompressionsbibliotek - körtidspaket

• enh: gbrowse

  GMOD Generic Genome Browser

• enh: samtools

  processing sequence alignments in SAM, BAM and CRAM formats

Hämta libbio-samtools-perl

Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Version	Paketstorlek	Installerad storlek	Filer
ppc64el	1.43-5+b1	184,7 kbyte	743,0 kbyte	[filförteckning]